Jatropha Genome Database

JcCA0279201.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0279201.20 - phase: 0 /partial
         (636 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008850 21 kDa protein precursor, putative                      202   2e-51

>30174.m008850 21 kDa protein precursor, putative
          Length = 648

 Score =  202 bits (102), Expect = 2e-51
 Identities = 297/362 (82%)
 Strand = Plus / Plus

                                                                       
Query: 250 acgagatcatacatgttgaaagtggcaaaagaactacaggcaaagaaagctaaggagtac 309
           ||||||||||||||||||||||||||||| |||||  |||||| |||||| ||||| || 
Sbjct: 256 acgagatcatacatgttgaaagtggcaaatgaactcgaggcaatgaaagcgaaggattat 315

                                                                       
Query: 310 caggtggtgaaagactgtttagaccaaataaatgatagcgtgcaacagcttagccagtca 369
           || |  |||||||||||||| ||||| |||||||||| |||| | |||||||||||||||
Sbjct: 316 caagcagtgaaagactgtttggaccagataaatgataccgtggagcagcttagccagtca 375

                                                                       
Query: 370 attagagagatccgccgcatgggaaggcaggaggaagctgcaggtggcggcgacatattt 429
           ||||||||| | || ||| | ||||| ||||| ||||| |  ||| | ||  |  | |||
Sbjct: 376 attagagagctacgtcgcttaggaagccaggaagaagcagttggtcgtggtaatgtcttt 435

                                                                       
Query: 430 tggcatataagtaatgttgagacttggactagcagcgccttgtctgatgctagctactgc 489
           ||||| |||||||| || ||||| ||||| ||    ||| | || ||||    |||||||
Sbjct: 436 tggcacataagtaacgtcgagacatggacgagtgctgccctatcagatgtatcctactgc 495

                                                                       
Query: 490 gttgatgcgtttcctggaaggagaatgagcaagttaaaggccacaatcaagggtagagtt 549
           ||| ||| |||||| || ||||||||||||||||| ||||||||||| ||||||| ||||
Sbjct: 496 gttaatgagtttccaggtaggagaatgagcaagttgaaggccacaattaagggtaaagtt 555

                                                                       
Query: 550 atgaacgtggcacaggctacgagcaatgctttaaccttgtttcaccgatatgctgcaagg 609
            |||| || |||||||| || |||||||| ||| |||||||||| || ||||| ||||||
Sbjct: 556 ttgaatgttgcacaggccaccagcaatgcgttagccttgtttcatcggtatgccgcaagg 615

             
Query: 610 ta 611
           ||
Sbjct: 616 ta 617