Jatropha Genome Database
- JcCA0279201.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0279201.10 - phase: 0 /partial
(707 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m008849 beta-tubulin cofactor d, putative 494 e-139
>30174.m008849 beta-tubulin cofactor d, putative
Length = 3783
Score = 494 bits (249), Expect = e-139
Identities = 587/699 (83%), Gaps = 3/699 (0%)
Strand = Plus / Plus
Query: 10 gaagaagaagacgacgagcatggttgcaaggagagagttttacagaagtactttttgcag 69
|||||||||||||||||||| |||| || |||||||||||||| || ||||| ||||||
Sbjct: 37 gaagaagaagacgacgagcacggttctaaagagagagttttacaaaaatacttcttgcag 96
Query: 70 gaatggaaactcgtaaagtctctcctggatgacatcgtttccaatggccgcgtctccgat 129
|||||||||||||| || |||||||| ||||||||||||| |||||||||||| |||||
Sbjct: 97 gaatggaaactcgtcaaatctctcctcgatgacatcgttttaaatggccgcgtcaccgat 156
Query: 130 ctttcctccgtccacaagatccgatccatcatggataagtatcagcaggaagggcaactt 189
|||||||||| |||||||||||||||| |||| |||||||||||||||||||| ||
Sbjct: 157 tcttcctccgtcaacaagatccgatccattttggacaagtatcagcaggaagggcagcta 216
Query: 190 ctggagccttacttggagagcatagtttctccattgatgtcaattatccgaactaagaca 249
|||||||||||||| |||| |||||| |||| || ||||||||| |||| ||||| ||
Sbjct: 217 ctggagccttacttagagacgatagttactcctttaatgtcaattgtccgtactaaaacg 276
Query: 250 atagaattaggcatagcttcggatgagattcttcaagtaattaagccaatttgcatcatt 309
|| || |||||| |||| | ||||||| ||| |||||||||| || |||||||| |||
Sbjct: 277 attgatttaggcgtagcaactaatgagatccttgaagtaattaaaccgatttgcataatt 336
Query: 310 atttattgccttgttactgtcggtggatacaaggcagttataaagttttttccacatcaa 369
|| || || || |||||||| ||||||| || | ||||||||||| ||||||||||||
Sbjct: 337 atatactgtctggttactgtttgtggatataaatccgttataaagttctttccacatcaa 396
Query: 370 gtttctaatttggagcttgcagtcgctctcttggacaagtgccatgatacagcttcaggg 429
||||| |||| || | ||||| |||| ||||| ||||| ||||| || ||||| | |
Sbjct: 397 gtttccgatttagaattagcagtttctctattggagaagtgtcatgacactgcttcggcg 456
Query: 430 acgtcgttgcggcaggaaagtacaggagaaatggaggcaaaatgtgtgatactgttgtgg 489
||||| ||||| || |||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 457 acgtctttgcgtcaagaaagtacaggagaaatggaggcaaaatgtgtaattctgttgtgg 516
Query: 490 ctttctattcttgtattagttccatttgatatctcctctgttgatactagtattgcaaa- 548
|||||||||||||| ||||| || ||||||||||| ||||| |||||||||||||||||
Sbjct: 517 ctttctattcttgttttagtaccctttgatatctcttctgtcgatactagtattgcaaat 576
Query: 549 --taataatgatatttgcaaacttgaaccctcccctctggttttgaggataatgaagttt 606
|| ||||||| || | |||||||| || | ||| ||||| ||||||| | || ||
Sbjct: 577 agtagtaatgatcttggtaaacttgagcctgctcctttggttctgaggatgttaaaattc 636
Query: 607 tctaaggattacctttctaatgcgggtcccatgcgcaccatggctggattgcttctctct 666
||||||||||| ||||| ||||| ||||| ||||| || |||||||| ||||| |||||
Sbjct: 637 tctaaggattatctttcaaatgctggtcctatgcgtacaatggctggtttgctactctca 696
Query: 667 aagcttctgacgcgtcccgatatgccaatggcctttacc 705
|||||| | || ||||| ||||||||| | |||||||||
Sbjct: 697 aagcttttaactcgtcctgatatgccactcgcctttacc 735