Jatropha Genome Database
- JcCA0277701.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0277701.10 - phase: 0 /pseudo/partial
(1395 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28153.m000280 conserved hypothetical protein 519 e-146
>28153.m000280 conserved hypothetical protein
Length = 1803
Score = 519 bits (262), Expect = e-146
Identities = 600/715 (83%)
Strand = Plus / Plus
Query: 446 atagctgtaagaccttgaagtccaatgaggacatcagaatagattttcttgaagatattg 505
|||| ||||||| ||||||| |||| | ||||| | || |||||||| ||||||||||
Sbjct: 860 atagttgtaagaatttgaagttcaatcaagacattaagattgattttctcgaagatattg 919
Query: 506 ttgaagctgctaaaaacaacaagaaaactttgtttttagcaatggagtcgagtatgaaca 565
|||||||||||| | ||||||||| ||||||||||||| |||||||||| | ||||| |
Sbjct: 920 ttgaagctgctagacacaacaagagaactttgtttttatcaatggagtcaataatgaata 979
Query: 566 tgatgagacaagttgagcttcaagagaagcttgcagagcaagcaaaagaagaagctgcta 625
|||||||| ||||||| ||||||||||| |||||| | || ||||| ||||| |||
Sbjct: 980 tgatgagaaaagttgaacttcaagagaaagctgcagaagatgccaaagaggaagcctcta 1039
Query: 626 gtgcaggtttggatattctaaaaaaggtggaggaacttgaacagatgctgagacatgcaa 685
|||||||||| || ||||||| |||| | | |||||| ||||||||||| ||||||||
Sbjct: 1040 gtgcaggtttagacattctaacgaaggcgaacgaacttaaacagatgctggaacatgcaa 1099
Query: 686 aggaggcaaatgacatgcatgcaggggaaatttatggtgagaaggcaattctggcaactg 745
|||| |||||||||||||||||||||||| |||||||||||| ||||||||| || ||||
Sbjct: 1100 aggatgcaaatgacatgcatgcaggggaagtttatggtgagagggcaattctagccactg 1159
Query: 746 aagtgagggagttgcagggtcggctactcagcttgtctgatgaaagggataaagctcttg 805
|||||||||||||||||| |||||| |||||||||||||||||||| || ||||||||||
Sbjct: 1160 aagtgagggagttgcaggctcggcttctcagcttgtctgatgaaagagacaaagctcttg 1219
Query: 806 caatacttgatgagatgaatcaaacactagagactcgtcttgctgctgcagaggagctaa 865
|||| ||||||||||| ||||| | || || || || ||||| ||||||||||| |
Sbjct: 1220 caattattgatgagatgcatcaatcccttgaagaacgactagctgcagcagaggagctga 1279
Query: 866 gaaaagctgctgagaaacagaagctggagaaggaagaatctgcnnnnnnngctcttgctg 925
||||| |||||||| ||||||||||| |||||||| |||| ||||||||||
Sbjct: 1280 agaaagcagctgagaagcagaagctggaacaggaagaagctgcacggaatgctcttgctg 1339
Query: 926 aacaagaagccatcatggacaaggtggtacaggagtccaagatactacaaagacaggcag 985
|||||||||||||||||| ||||||| |||||||||||||| |||| ||||||
Sbjct: 1340 aacaagaagccatcatgggtcaggtggtgcaggagtccaagatcatacagcaggaggcag 1399
Query: 986 aggaaaattctaagttgagggagtttcttgtggatcgcggtcatgttgttgacacattac 1045
| || ||||||||| | ||||||||||| |||| || |||| |||||||||||||||||
Sbjct: 1400 atgagaattctaagctacgggagtttcttatggaccgtggtcgtgttgttgacacattac 1459
Query: 1046 aaggagaaatatctgttatttgtcaagatgtgagactgctgaaagagagatttgatgaga 1105
|||||||||| ||||| || ||||| ||||| ||| |||||||||||||||||||||||
Sbjct: 1460 aaggagaaatttctgtgatctgtcaggatgtaagattgctgaaagagagatttgatgagc 1519
Query: 1106 atgttccactgagtaaatctatttcttctacccaaacaagttgcatcttagcctc 1160
||||| |||| || |||||||| || | |||||| |||||||||||||||||
Sbjct: 1520 gcattccattgagcaagtctatttcctcgagccaaaccagttgcatcttagcctc 1574
Score = 87.7 bits (44), Expect = 2e-16
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 1203 aggctcatccattagaagcagtgcatctgatctggcttctgagccaagggatacatctaa 1262
|||||||||||||||||||| ||| ||||||||| | |||| |||||||| ||||||||
Sbjct: 1578 aggctcatccattagaagcatcgcaactgatctggttcctgaaccaagggagacatctaa 1637
Query: 1263 gagccctaaagagagaagcc 1282
||||| |||||| |||||||
Sbjct: 1638 gagccttaaagatagaagcc 1657
Score = 73.8 bits (37), Expect = 3e-12
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 24 aggttgattggcgcattttaaaggctgttgctattgagcaccccaaagatgct 76
||||||||| ||||||| ||||||||||||| |||||||| ||||||||||||
Sbjct: 47 aggttgattcgcgcattctaaaggctgttgcaattgagcatcccaaagatgct 99