Jatropha Genome Database

JcCA0277661.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0277661.10 - phase: 0 
         (753 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30101.m000383 3-isopropylmalate dehydratase, putative                 210   9e-54

>30101.m000383 3-isopropylmalate dehydratase, putative
          Length = 765

 Score =  210 bits (106), Expect = 9e-54
 Identities = 397/494 (80%)
 Strand = Plus / Plus

                                                                       
Query: 229 ctctgctacgttgttggagacaacatcgacaccgaccaaataattcccgccgagtatcta 288
           |||||||| || || ||||||||||| |||||||||||||| || |||||||| || |||
Sbjct: 232 ctctgctatgtcgtcggagacaacatagacaccgaccaaatcatccccgccgaataccta 291

                                                                       
Query: 289 acccttgtaccttcaaacccagccgaatacgaaaagcttggctcttatgccttaattggc 348
           ||||| || || ||||| ||||||||||||||||| || || || |||||| ||||||| 
Sbjct: 292 accctagtcccatcaaatccagccgaatacgaaaaactcggttcgtatgccctaattggt 351

                                                                       
Query: 349 cttccagcctcttatgaaaccaggttcattgaaccgggtgaaacgaagaccaaatactca 408
           || ||||| || ||  | |||||||| || |||||    || | ||| || |||||| ||
Sbjct: 352 ctaccagcatcatacaagaccaggtttatggaaccaaacgagatgaaaacgaaatacaca 411

                                                                       
Query: 409 atagtgattggaggcgataattttggatgcggatcatcgcgtgagcacgcgccggtggct 468
           || |||||||||||||||||||| || |||||||| || |||||||| ||||| ||||| 
Sbjct: 412 atcgtgattggaggcgataatttcgggtgcggatcgtcacgtgagcatgcgccagtggca 471

                                                                       
Query: 469 cttggtgcggctggcgttgcggctgtggttgcggaatcttatgctcggatcttcttcagg 528
           || || || || || || || || ||||||||||| ||||||||  | || ||||| |||
Sbjct: 472 ctaggagcagccggagtagctgcggtggttgcggagtcttatgccagaatattctttagg 531

                                                                       
Query: 529 aactcggtggccaccggagaaatttatcctctggaatcagaggttaggatttgtgaggaa 588
           || ||||| || || ||||| || |||||  | ||| | || || ||||| |||||||| 
Sbjct: 532 aattcggtagcaacaggagagatatatccgttagaaacggaagtgaggatatgtgaggag 591

                                                                       
Query: 589 tgcaaaactggggatgtggtgaccattgagcttgcagagggtcgcttgattaatcacacg 648
           || ||||||||||||||||| || |||||| | || |||   || ||||| ||||| |||
Sbjct: 592 tgtaaaactggggatgtggtcactattgagttagctgagaaccgtttgatcaatcatacg 651

                                                                       
Query: 649 actggaaaggaatacatacttaagcccattggagatgctggtccggtgattgaggctgga 708
           ||||| || ||||| |   | ||||| ||||| ||||||||||| || ||||| ||||| 
Sbjct: 652 actgggaaagaatataagttgaagcctattggtgatgctggtcccgttattgaagctggt 711

                         
Query: 709 gggatttttgccta 722
           ||||||||||||||
Sbjct: 712 gggatttttgccta 725