Jatropha Genome Database

JcCA0276311.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0276311.10 + phase: 0 
         (492 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29681.m001339 ATP-binding cassette transporter, putative              357   4e-98

>29681.m001339 ATP-binding cassette transporter, putative
          Length = 4302

 Score =  357 bits (180), Expect = 4e-98
 Identities = 339/392 (86%)
 Strand = Plus / Plus

                                                                       
Query: 84  aactggctcaagagctttgcccaccttgattaatgctgtgcgcgacactattgagggttt 143
           ||||||||||||||||||||| || ||||||||||  ||||| |||||  |||||| | |
Sbjct: 408 aactggctcaagagctttgcctactttgattaatgtcgtgcgagacacctttgaggatat 467

                                                                       
Query: 144 gatggctggtttgggactatttcatcctaataaactttctctaaccattttgaacgatgt 203
             || | |||||| || ||||||  | ||| |||| ||||||||| ||| |||| ||  |
Sbjct: 468 actgaccggtttgagaatatttcgacttaagaaacattctctaactattctgaatgacat 527

                                                                       
Query: 204 cagtggtgttataaaaccgggaaggatgactttgctcttaggaccaccaggttctggcaa 263
            |||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 aagtggtgcaataaaaccaggaaggatgactttgctcttaggaccaccaggttctggcaa 587

                                                                       
Query: 264 atcaacgttgcttttagctcttgcggggaagcttgccaagaatataaagaaatctggaaa 323
           |||||| ||||||||||||||||| ||||| |||| ||||||| |||||| | |||||| 
Sbjct: 588 atcaacattgcttttagctcttgccgggaaacttgacaagaatttaaagagaactggaag 647

                                                                       
Query: 324 tattacatacaatgggcacaagcttgatgagttttatgttaaaaggacttctgcatacat 383
           ||||||||||||||| |||||||||||| | |||||||||| ||||||||||||||||||
Sbjct: 648 tattacatacaatggccacaagcttgatcatttttatgttagaaggacttctgcatacat 707

                                                                       
Query: 384 cagccaaatagataaccacattgcagagcttactgtccgggaaaccttagattttgctgc 443
           ||||||||||||||| || ||||| |||||||| || || || || ||||||||||||||
Sbjct: 708 cagccaaatagataatcatattgcggagcttacagtacgagagactttagattttgctgc 767

                                           
Query: 444 tagttgccaaggcgcaagtgaaagctttgcag 475
           ||| || ||||| ||||||||| |||||||||
Sbjct: 768 tagctgtcaaggtgcaagtgaaggctttgcag 799