Jatropha Genome Database

JcCA0274811.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0274811.10 - phase: 0 
         (1212 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29642.m000277 conserved hypothetical protein                          240   2e-62

>29642.m000277 conserved hypothetical protein
          Length = 792

 Score =  240 bits (121), Expect = 2e-62
 Identities = 315/379 (83%), Gaps = 3/379 (0%)
 Strand = Plus / Plus

                                                                        
Query: 805  aattatcatcttgtggtgttaaaagggtgcctctcagctggggtttattgtaattatgga 864
            ||||||||||||||||| ||||||||||| || || || |  || || || |||||||||
Sbjct: 400  aattatcatcttgtggttttaaaagggtgtctttctgcggctgtgtactgcaattatgga 459

                                                                        
Query: 865  agaatagagatatgggtaatgaaagagtataatgtgaaagaatcctgggttaaagaatat 924
            ||| ||||||| |||   |||||||||||||||||||| ||||||||||| ||  |||| 
Sbjct: 460  agattagagatttggactatgaaagagtataatgtgaaggaatcctgggtgaagcaatac 519

                                                                        
Query: 925  agcattggaagttacatgccaaaagggttgaagcaaaatcttgaaaggccatttttaaag 984
            |   |||||| | ||||||||||||| ||||| |||||||| ||||||||   |  ||||
Sbjct: 520  attgttggaactcacatgccaaaaggattgaaacaaaatctggaaaggcc---tacaaag 576

                                                                        
Query: 985  atttggaaaaactcattgaagggaagagttgttagagttttaggagttttaaagaatgga 1044
            |||||||| ||  | |  || ||||||||||||||| |||||||  || | |||||||| 
Sbjct: 577  atttggaagaatgcttcaaatggaagagttgttagaattttaggtcttctgaagaatggt 636

                                                                        
Query: 1045 gaggttttgttggagtataaaagtcgaattcttgtttcttatgacccaaatcttggaaaa 1104
            ||| |||||||||||||||||||  || |||||||| |||||||||||||||||||||| 
Sbjct: 637  gagcttttgttggagtataaaagcagagttcttgttacttatgacccaaatcttggaaag 696

                                                                        
Query: 1105 tttaaggatctttcattacaaggaatacctaaattgtttcaaacaattgttcatgttgga 1164
            |||||||| ||| ||||||||||  |||| |||| ||||||||  || |||||||| |||
Sbjct: 697  tttaaggaccttacattacaaggcttaccaaaatggtttcaaagtatggttcatgtagga 756

                               
Query: 1165 agcttcaattggattgata 1183
            ||| | |||||||||||||
Sbjct: 757  agcctaaattggattgata 775