Jatropha Genome Database

JcCA0274511.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0274511.20 - phase: 0 
         (513 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008724 conserved hypothetical protein                          428   e-119

>30128.m008724 conserved hypothetical protein
          Length = 555

 Score =  428 bits (216), Expect = e-119
 Identities = 420/488 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttatccaccagagcattatgggttgtgtagtaatggcgctttgaagatcgttttg 60
           |||||||||||| |||||||||| ||||||||||||||||| ||||| | ||| ||||| 
Sbjct: 1   atggcttatccatcagagcattacgggttgtgtagtaatggtgctttaaggatagtttta 60

                                                                       
Query: 61  gcattggtggctacattcttgattgggtacgttgtgagaccccaattgcactcaagagag 120
              |||||||||||||||||| ||||||||  ||||||||| | |||| |||| || |||
Sbjct: 61  ttgttggtggctacattcttggttgggtacaatgtgagaccgcgattgtactcgagggag 120

                                                                       
Query: 121 agttcaagtgctcaagcttcatgtccttgtgactgtgattgctctgaagaatttgccctg 180
           ||||||||| |||||| ||||||||||||||| ||||| ||| ||||||| ||||||  |
Sbjct: 121 agttcaagtactcaagtttcatgtccttgtgattgtgagtgccctgaagagtttgcctgg 180

                                                                       
Query: 181 tttttgccattagactgtagtaacgatgatcccgatatacatgaagaaatggagaaggat 240
           || || |||||||||||  | ||  ||||||| ||| || | |||||||||   ||||||
Sbjct: 181 ttcttaccattagactgcggcaatcatgatccggatgtatacgaagaaatgagaaaggat 240

                                                                       
Query: 241 attgtagctttactgtcagaggaaattgctttgcagagaagagtggctaatgattcactg 300
           ||  |||||||||| ||||| ||||||||||||||||| |||||||||||||||||  ||
Sbjct: 241 ataatagctttactatcagaagaaattgctttgcagaggagagtggctaatgattccttg 300

                                                                       
Query: 301 gagcacaccagggcattagtaatggatgccaggaaagcctctttacactatcaaaaagaa 360
           |||||||||||| || ||||||||||| | | || ||| || ||||||||||||||||||
Sbjct: 301 gagcacaccaggacactagtaatggattctaagacagcttccttacactatcaaaaagaa 360

                                                                       
Query: 361 gcagaaaaatgtaatgcacaaacagaaacttgtgaagaagcaagggagagagctgaagca 420
           |||||||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||
Sbjct: 361 gcagaaaagtgtaatgcacaaacagaaacttgtgaagaagcaagagagcgggcagaagca 420

                                                                       
Query: 421 ggactagttgaggagtataaacttacagcagagtgggagaaacgagctcgagaactcgga 480
           | |||||| ||||||||||| ||| |||||  ||||||||||||||| |||||||| |||
Sbjct: 421 gaactagtagaggagtataagctttcagcattgtgggagaaacgagcacgagaacttgga 480

                   
Query: 481 tgggaaga 488
           ||||||||
Sbjct: 481 tgggaaga 488