Jatropha Genome Database
- JcCA0273631.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0273631.30 - phase: 1 /partial
(200 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28694.m000662 nucleic acid binding protein, putative 234 2e-61
29794.m003304 nucleic acid binding protein, putative 157 3e-38
29883.m001956 nucleic acid binding protein, putative 131 2e-30
30128.m008805 nucleic acid binding protein, putative 105 1e-22
29647.m001996 nucleic acid binding protein, putative 94 4e-19
29643.m000323 nucleic acid binding protein, putative 86 9e-17
29646.m001073 nucleic acid binding protein, putative 84 3e-16
29780.m001361 zinc finger protein, putative 84 3e-16
29780.m001390 nucleic acid binding protein, putative 72 1e-12
29780.m001362 nucleic acid binding protein, putative 66 8e-11
28952.m000016 nucleic acid binding protein, putative 62 1e-09
30170.m014220 nucleic acid binding protein, putative 56 8e-08
29983.m003121 nucleic acid binding protein, putative 52 1e-06
30078.m002347 nucleic acid binding protein, putative 52 1e-06
>28694.m000662 nucleic acid binding protein, putative
Length = 1659
Score = 234 bits (118), Expect = 2e-61
Identities = 139/146 (95%)
Strand = Plus / Plus
Query: 1 cagacccagatgcagaagtgatggctttatcaccaaagactttaatggcaacaaacagat 60
|||||||||||||||||||||| ||| |||||||||||||||| ||||||||||| ||||
Sbjct: 200 cagacccagatgcagaagtgatagctctatcaccaaagactttgatggcaacaaatagat 259
Query: 61 ttgtatgtgagatctgtaacaaagggtttcaaagagatcagaatcttcagctacatagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 260 ttgtatgtgagatctgtaacaaagggtttcaaagagatcagaatcttcaactccatagaa 319
Query: 121 gagggcataatctaccatggaagcta 146
||||||||||||| ||||||||||||
Sbjct: 320 gagggcataatctgccatggaagcta 345
>29794.m003304 nucleic acid binding protein, putative
Length = 1341
Score = 157 bits (79), Expect = 3e-38
Identities = 127/143 (88%)
Strand = Plus / Plus
Query: 1 cagacccagatgcagaagtgatggctttatcaccaaagactttaatggcaacaaacagat 60
|||||||||||||||||||||| |||||||| || || ||| ||||||| || ||| | |
Sbjct: 14 cagacccagatgcagaagtgatagctttatctcccaaaactctaatggcgaccaaccgct 73
Query: 61 ttgtatgtgagatctgtaacaaagggtttcaaagagatcagaatcttcagctacatagaa 120
|| |||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct: 74 ttatatgtgagatctgtaacaaaggatttcagagagatcagaatcttcagcttcatagaa 133
Query: 121 gagggcataatctaccatggaag 143
||||||| ||||| || ||||||
Sbjct: 134 gagggcacaatcttccgtggaag 156
>29883.m001956 nucleic acid binding protein, putative
Length = 1401
Score = 131 bits (66), Expect = 2e-30
Identities = 123/142 (86%)
Strand = Plus / Plus
Query: 1 cagacccagatgcagaagtgatggctttatcaccaaagactttaatggcaacaaacagat 60
||||||| ||||| |||||| | || ||||| |||||||| || | || || || ||||
Sbjct: 173 cagaccctgatgctgaagtggtagcattatctccaaagaccctactagctaccaatagat 232
Query: 61 ttgtatgtgagatctgtaacaaagggtttcaaagagatcagaatcttcagctacatagaa 120
|||| |||||||||||||||||||||||||||||||||||||||||||| || || ||||
Sbjct: 233 ttgtgtgtgagatctgtaacaaagggtttcaaagagatcagaatcttcaacttcacagaa 292
Query: 121 gagggcataatctaccatggaa 142
|||| |||||||| ||||||||
Sbjct: 293 gaggacataatcttccatggaa 314
>30128.m008805 nucleic acid binding protein, putative
Length = 1542
Score = 105 bits (53), Expect = 1e-22
Identities = 122/145 (84%)
Strand = Plus / Plus
Query: 1 cagacccagatgcagaagtgatggctttatcaccaaagactttaatggcaacaaacagat 60
||||||| |||||||||| || ||| |||||||||| || | |||| ||||||||||
Sbjct: 233 cagaccctaatgcagaagttattgctctatcaccaaatacacttctggctacaaacagat 292
Query: 61 ttgtatgtgagatctgtaacaaagggtttcaaagagatcagaatcttcagctacatagaa 120
|||||||||| ||||| |||||||| || |||||||| |||||||||||| | ||| |
Sbjct: 293 ttgtatgtgaaatctgcaacaaaggtttccaaagagaccagaatcttcagttgcatcggc 352
Query: 121 gagggcataatctaccatggaagct 145
||||||| ||||| |||||||||||
Sbjct: 353 gagggcacaatctgccatggaagct 377
>29647.m001996 nucleic acid binding protein, putative
Length = 1896
Score = 93.7 bits (47), Expect = 4e-19
Identities = 104/123 (84%)
Strand = Plus / Plus
Query: 24 gctttatcaccaaagactttaatggcaacaaacagatttgtatgtgagatctgtaacaaa 83
|||||||| |||| ||| | |||||||| ||| | ||||||||||| || || ||||||
Sbjct: 304 gctttatcgccaacaactcttatggcaaccaaccggtttgtatgtgaaatatgcaacaaa 363
Query: 84 gggtttcaaagagatcagaatcttcagctacatagaagagggcataatctaccatggaag 143
||||||||||| ||||| ||||| || || ||||||||||| ||||| || |||||||||
Sbjct: 364 gggtttcaaagggatcaaaatctacaactgcatagaagaggccataaccttccatggaag 423
Query: 144 cta 146
|||
Sbjct: 424 cta 426
>29643.m000323 nucleic acid binding protein, putative
Length = 1632
Score = 85.7 bits (43), Expect = 9e-17
Identities = 112/135 (82%)
Strand = Plus / Plus
Query: 9 gatgcagaagtgatggctttatcaccaaagactttaatggcaacaaacagatttgtatgt 68
||||||||||| | |||||||||||||| || | ||||||||||||||||| | ||
Sbjct: 139 gatgcagaagttgtagctttatcaccaaaatctctcatggcaacaaacagattcctttgc 198
Query: 69 gagatctgtaacaaagggtttcaaagagatcagaatcttcagctacatagaagagggcat 128
|| ||||| ||||| || ||||||||||| || || ||||| || ||||||||||| ||
Sbjct: 199 gaaatctgcaacaagggttttcaaagagaccaaaaccttcaactccatagaagaggacac 258
Query: 129 aatctaccatggaag 143
||||| |||||||||
Sbjct: 259 aatcttccatggaag 273
>29646.m001073 nucleic acid binding protein, putative
Length = 1563
Score = 83.8 bits (42), Expect = 3e-16
Identities = 117/142 (82%)
Strand = Plus / Plus
Query: 1 cagacccagatgcagaagtgatggctttatcaccaaagactttaatggcaacaaacagat 60
|||| ||||||||||| ||||| ||| |||||||||| || | ||||||| |||||||
Sbjct: 122 cagatccagatgcagaggtgattgctctatcaccaaaaaccctgttggcaactaacagat 181
Query: 61 ttgtatgtgagatctgtaacaaagggtttcaaagagatcagaatcttcagctacatagaa 120
|||||||||| ||||| || || ||||||||||| ||||| || | ||||| ||| |
Sbjct: 182 ttgtatgtgaaatctgcaataaggggtttcaaagggatcaaaacttacagcttcatcgcc 241
Query: 121 gagggcataatctaccatggaa 142
| || |||||||||||||||||
Sbjct: 242 gcggccataatctaccatggaa 263
>29780.m001361 zinc finger protein, putative
Length = 1716
Score = 83.8 bits (42), Expect = 3e-16
Identities = 120/146 (82%)
Strand = Plus / Plus
Query: 1 cagacccagatgcagaagtgatggctttatcaccaaagactttaatggcaacaaacagat 60
|||| ||||||||||| ||||| || |||| || ||||| |||||||||||||||| |
Sbjct: 179 cagatccagatgcagaggtgatagcactatctcccaagaccctaatggcaacaaacaggt 238
Query: 61 ttgtatgtgagatctgtaacaaagggtttcaaagagatcagaatcttcagctacatagaa 120
| ||||||| | || ||||||||||||||||| || || || | ||||| |||||||
Sbjct: 239 tcatatgtgaagtatgcaacaaagggtttcaaagggagcaaaacttacagctccatagaa 298
Query: 121 gagggcataatctaccatggaagcta 146
|||| ||||| ||||| |||||||||
Sbjct: 299 gaggacataacctaccttggaagcta 324
>29780.m001390 nucleic acid binding protein, putative
Length = 1434
Score = 71.9 bits (36), Expect = 1e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 63 gtatgtgagatctgtaacaaagggtttcaaagagatcagaatcttcagctacatagaaga 122
|||||||||||||||||| |||||||||||||||| ||||| | || | |||||||||
Sbjct: 211 gtatgtgagatctgtaaccaagggtttcaaagagaccagaacttacaaatgcatagaaga 270
Query: 123 gggcataatctaccatggaa 142
||||||| ||||||||||
Sbjct: 271 aggcataaagtaccatggaa 290
>29780.m001362 nucleic acid binding protein, putative
Length = 1770
Score = 65.9 bits (33), Expect = 8e-11
Identities = 114/141 (80%)
Strand = Plus / Plus
Query: 6 ccagatgcagaagtgatggctttatcaccaaagactttaatggcaacaaacagatttgta 65
||||| ||||| ||||| || |||| || ||||| |||||||||||||||| || ||
Sbjct: 160 ccagacgcagaggtgatagcactatctcccaagaccctaatggcaacaaacaggttcata 219
Query: 66 tgtgagatctgtaacaaagggtttcaaagagatcagaatcttcagctacatagaagaggg 125
|||||| | || ||||||||||| ||||| || || || || ||||| || ||||||||
Sbjct: 220 tgtgaggtatgcaacaaagggttccaaagggagcaaaacctacagctccacagaagagga 279
Query: 126 cataatctaccatggaagcta 146
||||| || || |||||||||
Sbjct: 280 cataacctgccttggaagcta 300
>28952.m000016 nucleic acid binding protein, putative
Length = 1329
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 62 tgtatgtgagatctgtaacaaagggtttcaaagagatca 100
||||||||||||||| ||| |||||||||||||||||||
Sbjct: 168 tgtatgtgagatctgcaaccaagggtttcaaagagatca 206
>30170.m014220 nucleic acid binding protein, putative
Length = 1509
Score = 56.0 bits (28), Expect = 8e-08
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 1 cagacccagatgcagaagtgatggctttatcaccaaagactttaatggcaacaaacagat 60
|||| |||||||| |||||||| |||||||||||||| || | | || || ||||| |
Sbjct: 143 cagatccagatgctgaagtgattgctttatcaccaaaaacactgttagccacgaacaggt 202
Query: 61 ttgtatgtgagatctgtaacaaagggtttcaa 92
| || ||||||||||| |||||||| ||||||
Sbjct: 203 tcgtgtgtgagatctgcaacaaaggctttcaa 234
>29983.m003121 nucleic acid binding protein, putative
Length = 1314
Score = 52.0 bits (26), Expect = 1e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 80 caaagggtttcaaagagatcagaatcttcagctacatagaagagggcataatctaccatg 139
|||||| || || |||||||||||||| ||||| ||| | ||||||| ||||| |||||
Sbjct: 36 caaaggattccagagagatcagaatctacagcttcatcggcgagggcacaatcttccatg 95
Query: 140 gaagct 145
||||||
Sbjct: 96 gaagct 101
>30078.m002347 nucleic acid binding protein, putative
Length = 1578
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 108 cagctacatagaagagggcataatctaccatggaagct 145
||||| ||||||||||||||||| || |||||||||||
Sbjct: 256 cagcttcatagaagagggcataaccttccatggaagct 293