Jatropha Genome Database
- JcCA0272091.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0272091.10 + phase: 0 /partial
(1271 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29686.m000873 conserved hypothetical protein 662 0.0
29785.m000941 conserved hypothetical protein 82 9e-15
>29686.m000873 conserved hypothetical protein
Length = 1881
Score = 662 bits (334), Expect = 0.0
Identities = 702/823 (85%), Gaps = 15/823 (1%)
Strand = Plus / Plus
Query: 1 atgtctccagcatcaaagtccaagaccaagtctaaagataaggcgtctgcaagggctgcc 60
||||||||||||||||| ||||| | |||| || |||||||| || |||| ||||||
Sbjct: 1 atgtctccagcatcaaaatccaaaa---agtccaaggataaggcctcagcaaaggctgct 57
Query: 61 aaggaacagaag---gcatctgacaaatcttctggatctaccaatactgcaagtggtact 117
||||||||| || |||||| || |||||||| ||||| || |||| |||||||| |
Sbjct: 58 aaggaacagcagaaagcatctagtaagtcttctgggtctactaacactgtaagtggtagt 117
Query: 118 cctgcaagtgcttataatccaatttctgggacatttcataccctagagataccatcagcc 177
|| |||||||| || ||||| | ||||||||||||||||| |||||||||| |||||
Sbjct: 118 ccagcaagtgcatacaatcctctctctgggacatttcatacgttagagataccgtcagct 177
Query: 178 acctcttcccctcatttccatgacaatggtcgtttcagaaatatagatgacacagatgaa 237
| |||||||| | |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 178 gcttcttccccacccttccatgataatggtcgtttcagaaatatagatgatacagatgag 237
Query: 238 cattccagtagtccacatggaactgtatccgaatatgattcagtgtcaaacaatggtagt 297
||||| ||||||||||||||||| || || ||||| ||||| || ||||||||||| |||
Sbjct: 238 cattctagtagtccacatggaacagtttctgaatacgattctgtttcaaacaatgggagt 297
Query: 298 tgctctggcgagtcagaagatccaaaagataagacaaccagttctactcggcaggaaacc 357
|||||||| || |||||||| || ||||| |||| || | ||| ||||| ||
Sbjct: 298 tgctctggtgaatcagaagacccgaaagagaaga-------tttt--tcgtcaggatact 348
Query: 358 gtgcctggtttagaaaatgacaggcgagagaagattcgtctgaagaatgagaagaagcac 417
|| |||||| |||| || ||||| ||||||||||| || ||||| ||||||||||||||
Sbjct: 349 gtacctggtctagacaacgacagacgagagaagatccggctgaaaaatgagaagaagcat 408
Query: 418 cagcgccagaaagagaggcgggcacaagagttgcatgagcgttgcagtgggtatctgatg 477
||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 409 cagcgtcagagggagaggcgggcacaagagttgcatgagcgttgcagtggatttctgatg 468
Query: 478 tcgagaaaattagaagccctttcagagcagcttgtggcaatggggttttctcatgaacga 537
|| |||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 469 tctagaaaattagaatccctttctcagcagctcgtggcaatggggttttctcatgaacgg 528
Query: 538 gcaacattggcccttgtgttgaatgagggcagggtagaagaatcagttaactggcttttt 597
||||| ||||||||||| ||||||||||||||||||||| ||||||| |||||||| |||
Sbjct: 529 gcaaccttggcccttgttttgaatgagggcagggtagaacaatcagtaaactggctgttt 588
Query: 598 gaagggaatgaagaggaagcccgcaataaggactctaaacttggaaccagcagtaactta 657
|| ||||||||||||||||| || || |||||| |||||| ||||| ||| ||||||||
Sbjct: 589 gaggggaatgaagaggaagctcgtaacaaggacactaaacgtggaagcagtggtaactta 648
Query: 658 aaaattgacattagtgaggagcttgctcagatatcagtattagaggtgaggtacaaatgc 717
|||||||| |||||||| |||||||||||| | ||| ||| || |||||||||||||||
Sbjct: 649 aaaattgatattagtgatgagcttgctcagctctcaacattggaagtgaggtacaaatgc 708
Query: 718 tcaaagcaggaggttgaaagagcaattgttgcttgtgagggtgatctgttgaaggcagaa 777
|||| |||||||| |||||||| ||||||||||||| |||||||| |||||||||||
Sbjct: 709 tcaagacaggaggtcgaaagagctgttgttgcttgtgaaggtgatcttctgaaggcagaa 768
Query: 778 gagatcttacaagcacaaaagctggaacaacctgccactccac 820
|||||| ||||||||||||||| ||||| ||||||||||||||
Sbjct: 769 gagatcatacaagcacaaaagcaggaaccacctgccactccac 811
Score = 172 bits (87), Expect = 3e-42
Identities = 137/153 (89%), Gaps = 3/153 (1%)
Strand = Plus / Plus
Query: 1115 ttggtgtttctggaaatgaagggaaaaatcatcagcatatactgagggaaccaatagtta 1174
||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 1097 ttggtgtttctggaaatgaagggaaaaatcatcagcaaatactgagggaaccagtagttg 1156
Query: 1175 tgatgcagcgtcgccaatctataaatgccaaacaaaatcaagtccctagcataagtgcct 1234
|||||||||||| |||||| ||||||||||| |||||| |||||||||| |||| |||
Sbjct: 1157 tgatgcagcgtccccaatccataaatgccaagcaaaatgaagtccctagtataa---cct 1213
Query: 1235 caccttctgtaacagctggatggtattcaaata 1267
||| ||| ||||||||||||||||||||||
Sbjct: 1214 atcctgttgtcacagctggatggtattcaaata 1246
>29785.m000941 conserved hypothetical protein
Length = 1992
Score = 81.8 bits (41), Expect = 9e-15
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 400 aagaatgagaagaagcaccagcgccagaaagagaggcgggcacaagagttgcatgagcgt 459
||||||||||||||||| || || || || |||||||| || || || |||||||||||
Sbjct: 391 aagaatgagaagaagcatcaacgtcaaaaggagaggcgagcccaggaattgcatgagcga 450
Query: 460 tgcagtgggtatctgatgtcgagaaaattagaagccctttcagagcagcttgtggcaatg 519
|| ||||| ||||| ||||| ||||| ||||||| ||| | | |||||||| ||||||
Sbjct: 451 tgtagtggctatctcatgtcaagaaagctagaagcacttgctcaacagcttgttgcaatg 510
Query: 520 gggttttctcatgaacg 536
|| ||||| ||||||||
Sbjct: 511 ggattttcacatgaacg 527