Jatropha Genome Database

JcCA0271351.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0271351.20 - phase: 1 /pseudo/partial
         (731 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29647.m002030 monooxygenase, putative                                 252   3e-66

>29647.m002030 monooxygenase, putative
          Length = 1134

 Score =  252 bits (127), Expect = 3e-66
 Identities = 398/486 (81%), Gaps = 3/486 (0%)
 Strand = Plus / Plus

                                                                       
Query: 180 tacgtttctcatttcaagatttctcctatctatcaaagatccgttgagttggccacttat 239
           ||||||||||||||||||||||||||| | || |||||||  |||||||| || || || 
Sbjct: 256 tacgtttctcatttcaagatttctcctttgtaccaaagatgtgttgagttagcaacatac 315

                                                                       
Query: 240 gatgaagggataaagaaattgattcttaaggccaagaatgttagttctggtgatattgag 299
           ||| |||| |  ||||||| ||||||||||| || |||||| | |||||||||| |||| 
Sbjct: 316 gatcaaggaaccaagaaatggattcttaaggtcaggaatgtgaattctggtgatgttgaa 375

                                                                       
Query: 300 gaatattctgcaagttttttggtggttgccagtggagaaacttgtgatcctttcatacct 359
           || || ||||| || |||||| | || || || ||||||||||| |||||||| ||||| 
Sbjct: 376 gattactctgctaggtttttgatcgtggctagcggagaaacttgcgatccttttatacca 435

                                                                       
Query: 360 gagattgaaggattgagtagttttaatggcgatttctttcattctacacagttcaaaaat 419
           ||  |||||||| ||| |||||| | |||||||    |||| ||||| ||||||||||| 
Sbjct: 436 gatgttgaaggactgaatagtttcagtggcgatgctcttcactctacccagttcaaaaa- 494

                                                                       
Query: 420 tagcaaggcttatatagagacaagaatcttttggttgttgggtctggtaattccggtatg 479
             ||||||||  |||||| |||||||| || |||||||||| ||||||||||| ||||||
Sbjct: 495 cggcaaggct--tatagaaacaagaatgttctggttgttggttctggtaattctggtatg 552

                                                                       
Query: 480 gagattgctttagatctagcccaccatggtgccaaaacttccattgttgtccgtagcccg 539
           ||||| || ||||| || |   | |||||||||||||||||||| || || |||||||||
Sbjct: 553 gagatcgcattagaccttgtaaatcatggtgccaaaacttccatcgtcgttcgtagcccg 612

                                                                       
Query: 540 gttcatgttctatacagagagatggtgttcttgggattggttatgtcgaagtattttcca 599
           |||||  |||| |  || |||||||||| |||||  |||| ||||| |||||||||||||
Sbjct: 613 gttcacattctttctagggagatggtgtacttggctttggctatgttgaagtattttcca 672

                                                                       
Query: 600 ttggggatggttgactcattcatggtgttgcttagcaaacttgtctatggagatttgacc 659
           || ||  |||| ||||||||  ||||||||||||||||  |||| |  ||||| ||||||
Sbjct: 673 ttaggtttggtggactcattgctggtgttgcttagcaaggttgtattcggagacttgacc 732

                 
Query: 660 aagtat 665
           ||||||
Sbjct: 733 aagtat 738