Jatropha Genome Database
- JcCA0267571.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0267571.10 - phase: 2 /partial
(819 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30131.m007101 DNA replication licensing factor MCM4, putative 511 e-144
>30131.m007101 DNA replication licensing factor MCM4, putative
Length = 2604
Score = 511 bits (258), Expect = e-144
Identities = 368/402 (91%), Gaps = 2/402 (0%)
Strand = Plus / Plus
Query: 356 cagcctgatatatatgacagactaaccaagtctttggcaccaaatatttgggagctggat 415
||||||||||| || ||||||||||| |||||| |||||||||| ||||||||||| |||
Sbjct: 1360 cagcctgatatttacgacagactaacaaagtctctggcaccaaacatttgggagcttgat 1419
Query: 416 gatgtgaagagaggtcttttgtgccagctctttggcgggaatgccctgaagttgccatct 475
|||||||||||||| ||| | |||||||||||||| || ||||| ||||||||||||||
Sbjct: 1420 gatgtgaagagaggccttctctgccagctctttggtggaaatgctgtgaagttgccatct 1479
Query: 476 ggtgctagcttccgtggtgatatcaatatacttcttgttggtgatccaggaaccagcaag 535
|||||||||||||| || |||||||| || ||||||||||||||||| |||||||| |||
Sbjct: 1480 ggtgctagcttccgaggggatatcaacatccttcttgttggtgatcctggaaccagtaag 1539
Query: 536 tcccagctgctgcaatacatacacaaattatctccccgtggcatctatactagtggaaga 595
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1540 tcccagctgctccaatacatacacaaattatctccccgtggcatctatactagcggaaga 1599
Query: 596 gggagctctgctgttggcttgactgcttatgttagcaaagaccctgagacaggagaaacg 655
|| || |||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 1600 ggaagttctgctgttggcttgactgcctatgtcagcaaagatcctgagacaggggaaacg 1659
Query: 656 gtcctggagagtggagcacttgttctgagtgacagagggatctgctgtattgatgaattt 715
|| |||||||||||||||||||| ||||||||| |||| ||||| |||||||||||||||
Sbjct: 1660 gttctggagagtggagcacttgtcctgagtgaccgaggaatctgttgtattgatgaattt 1719
Query: 716 gacaaaatgtctgaaaaatgc-aggagcatgttgcatgaggt 756
||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 1720 gacaaaatgtctg-aaaatgcaaggagcatgttgcatgaggt 1760
Score = 303 bits (153), Expect = 9e-82
Identities = 189/201 (94%)
Strand = Plus / Plus
Query: 5 gctgataagcagattgtgaggctccaggagacgcctgatgagatccctgaaggaggaaca 64
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 886 gctgataagcagattgtgaggctccaggagacacctgatgagattcctgaaggaggaaca 945
Query: 65 ccacacacagtgagcttgttgatgcatgacaagctggtggatgctgtaaagcctggtgac 124
|||||||| |||||||||||| |||||||||||||||| ||| ||| ||||||||||||
Sbjct: 946 ccacacacggtgagcttgttgttgcatgacaagctggtagatactggaaagcctggtgat 1005
Query: 125 agagttgaggtcactgggatttatagagctatgagtgtgagagttgggcccactcagaga 184
|||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 1006 agagttgaggtcactgggatttatagagctatgagtgtcagagtcggacccacacagaga 1065
Query: 185 actgtaaaatcattattcaag 205
|||||||||||||||||||||
Sbjct: 1066 actgtaaaatcattattcaag 1086
Score = 83.8 bits (42), Expect = 2e-15
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 204 agacttacattgattgtcttcatataaagaaagctgacaagtcaagaatg 253
||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 1124 agacttacattgactgtcttcatataaagaaaactgacaagtcaagaatg 1173