Jatropha Genome Database
- JcCA0265541.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0265541.10 + phase: 1 /pseudo/partial
(479 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29912.m005302 threonine synthase, putative 504 e-142
29706.m001318 threonine synthase, putative 234 4e-61
29657.m000487 receptor serine/threonine kinase, putative 111 4e-24
>29912.m005302 threonine synthase, putative
Length = 1620
Score = 504 bits (254), Expect = e-142
Identities = 415/466 (89%), Gaps = 2/466 (0%)
Strand = Plus / Plus
Query: 1 gctgcaaatgctaatccactttacttgtattacaagtccggatgggaagatttttaagcc 60
||||| ||||||||||| ||||| || ||||||||||| |||||| |||||||| |||||
Sbjct: 1141 gctgctaatgctaatccgctttatttatattacaagtcaggatggaaagatttt-aagcc 1199
Query: 61 tgtgaaagcgaattccacattttgcttcggctatacaaattggggacccggtttctatag 120
||||||||||||||| |||||| ||||| |||||||| ||||| ||||||||||||||||
Sbjct: 1200 tgtgaaagcgaattcaacattt-gcttcagctatacagattggagacccggtttctatag 1258
Query: 121 acagagctgtatatgctttgaagaattcaaatgggattgttgaggaagccacagaggagg 180
| ||||||||||||||||| ||||| | || || ||||| |||||||||||||| ||||
Sbjct: 1259 atagagctgtatatgctttaaagaaatgcaacggaattgtcgaggaagccacagaagagg 1318
Query: 181 agttgatggatgcaatggcacaagctgattctacagggatgtttatctgcccacatacgg 240
||||||||||||||||||| ||||| |||||||| ||||||||||| ||||| ||||| |
Sbjct: 1319 agttgatggatgcaatggcgcaagccgattctactgggatgtttatatgccctcatactg 1378
Query: 241 gagttgcattgaccgcattgaataagcttaggaatagtggggttatagggcctatggata 300
||||||| ||||| || |||| ||||||||||||||||||| |||||||||||||||| |
Sbjct: 1379 gagttgcgttgacagctttgattaagcttaggaatagtgggattatagggcctatggaca 1438
Query: 301 ggacagtggtggtgagcacagctcatggattgaaatttactcaatctaagattgattacc 360
||||||| ||||| || ||||||||||| ||||||||||| || ||||||||||||||||
Sbjct: 1439 ggacagttgtggtcagtacagctcatgggttgaaatttacacagtctaagattgattacc 1498
Query: 361 actccaaagcaataccagatatggcctgcaggtttgctaaccctcctgtgcaagttaagg 420
||||||||||||||||||||||||| |||| || ||||||||| ||||||||||||||||
Sbjct: 1499 actccaaagcaataccagatatggcttgcaagtatgctaacccacctgtgcaagttaagg 1558
Query: 421 cagaatttggggctgtcatggatgttctgaagaattttttgggtaa 466
|||| ||||| || || ||||||||| |||||| | |||||||||
Sbjct: 1559 cagattttggtgcggtaatggatgttttgaagacgtatttgggtaa 1604
>29706.m001318 threonine synthase, putative
Length = 1596
Score = 234 bits (118), Expect = 4e-61
Identities = 304/366 (83%)
Strand = Plus / Plus
Query: 81 tttgcttcggctatacaaattggggacccggtttctatagacagagctgtatatgctttg 140
||||| || ||||| || ||||| || || ||||| || || |||||||| ||||| |||
Sbjct: 1192 tttgcatctgctattcagattggcgatcctgtttcaattgatagagctgtttatgcattg 1251
Query: 141 aagaattcaaatgggattgttgaggaagccacagaggaggagttgatggatgcaatggca 200
|| |||||||||||||||||||||||||| || ||||||||| | |||||||||||||||
Sbjct: 1252 aaaaattcaaatgggattgttgaggaagctactgaggaggagctaatggatgcaatggca 1311
Query: 201 caagctgattctacagggatgtttatctgcccacatacgggagttgcattgaccgcattg 260
||||| |||||||| ||||||||||| || |||||||| || || |||||| | ||||||
Sbjct: 1312 caagcagattctactgggatgtttatatgtccacatacaggggtggcattgtcagcattg 1371
Query: 261 aataagcttaggaatagtggggttatagggcctatggataggacagtggtggtgagcaca 320
| |||||| ||||||||||| ||||||||||||| ||| | |||||||| ||||| ||
Sbjct: 1372 attaagctcaggaatagtggagttatagggcctactgatcgaacagtggtagtgagtact 1431
Query: 321 gctcatggattgaaatttactcaatctaagattgattaccactccaaagcaataccagat 380
|||||||| ||||| |||| ||| ||||||||||||||||| | | || | ||
Sbjct: 1432 gctcatgggttgaagtttagtcagagcaagattgattaccactctagtgatattcaggac 1491
Query: 381 atggcctgcaggtttgctaaccctcctgtgcaagttaaggcagaatttggggctgtcatg 440
||||| || ||||||||||| || |||||| ||||||||||| |||||| | ||||||
Sbjct: 1492 atggcttgtaggtttgctaatccgcctgtgagtgttaaggcagattttgggtccgtcatg 1551
Query: 441 gatgtt 446
||||||
Sbjct: 1552 gatgtt 1557
>29657.m000487 receptor serine/threonine kinase, putative
Length = 1023
Score = 111 bits (56), Expect = 4e-24
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 147 tcaaatgggattgttgaggaagccacagaggaggagttgatggatgcaatggcacaagct 206
||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct: 865 tcaaatgggattgttgaggaagctactgaggaggagttaatggatgcaatggcacaagca 924
Query: 207 gattctacagggatgtttat 226
||||||| |||||||||||
Sbjct: 925 aattctactgggatgtttat 944