Jatropha Genome Database

JcCA0265151.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0265151.10 + phase: 0 
         (924 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30122.m000356 LysM domain GPI-anchored protein 2 precursor, puta...   117   1e-25

>30122.m000356 LysM domain GPI-anchored protein 2 precursor,
           putative
          Length = 1086

 Score =  117 bits (59), Expect = 1e-25
 Identities = 251/315 (79%)
 Strand = Plus / Plus

                                                                       
Query: 309 aaccctcttttcaatcaaaaacctccgatccatcctcggagctaacaacctccctctctc 368
           ||||||||| ||| ||||||||||||| || ||||| || ||||||||||||||||||||
Sbjct: 165 aaccctcttctcagtcaaaaacctccgctcaatcctaggcgctaacaacctccctctctc 224

                                                                       
Query: 369 aacctcaccaaaccaaaccatagccgcagcgcagacaatcaagatccctttcccctgcaa 428
            ||| || ||||| | | | || ||||      ||| ||||| ||||||||||| |||| 
Sbjct: 225 gaccccatcaaacaacaacgtacccgcccaaacgaccatcaaaatccctttcccatgcat 284

                                                                       
Query: 429 atgctccaacgggacgggcatctccaacaagaaaccaatctacactgttcaaccaggaga 488
            ||    |||||||| |||||||| ||||  |||||||||||||  || ||||| || ||
Sbjct: 285 ttgtagtaacgggactggcatctctaacagtaaaccaatctacatcgtccaacccggcga 344

                                                                       
Query: 489 cgggcttgatcatatagctagagatgtgttctcggctttggtgacgtacgaacaaatagc 548
           |   ||||||||||| |||||||| ||||||||||  |||||||||| | |  |||| ||
Sbjct: 345 catccttgatcatattgctagagaagtgttctcggggttggtgacgttccaggaaatcgc 404

                                                                       
Query: 549 ggccgttaataatataccggatgtgaacaagattttggttgggcaggagctgcagattcc 608
           ||||||||| | |||||||||||  ||   ||||  || ||| ||| |||||| ||||||
Sbjct: 405 ggccgttaacagtataccggatgctaatgtgattgaggctggacagaagctgcggattcc 464

                          
Query: 609 attaccgtgtagctg 623
            ||||||||||||||
Sbjct: 465 gttaccgtgtagctg 479