Jatropha Genome Database
- JcCA0264441.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0264441.10 - phase: 2 /pseudo/partial
(610 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28153.m000279 conserved hypothetical protein 204 4e-52
29726.m003904 conserved hypothetical protein 147 9e-35
>28153.m000279 conserved hypothetical protein
Length = 1434
Score = 204 bits (103), Expect = 4e-52
Identities = 181/207 (87%)
Strand = Plus / Plus
Query: 363 tgtcagaggatattgaagatggggaagtcattggtattatcacattagaggatgtttttg 422
||||||||||| |||| ||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 1184 tgtcagaggatgttgaggatggggaagtcattggtattatcacacttgaggatgtttttg 1243
Query: 423 aagaacttctgcaagaggaaattgtggatgagacagatgtatatgtagatgtacataaaa 482
||||||| | |||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 1244 aagaactattacaagaggagattgtggatgagacagatgtatatgttgatgtacataaaa 1303
Query: 483 ggattcgtgtggcagctgctgcagctgcttcttctgttgcacgagcaccatccaatcgaa 542
| || || || | ||||| ||||||||||||| ||| || ||||| ||||||||||| |
Sbjct: 1304 gaatacgagtagttgctgcagcagctgcttcttatgtggctcgagccccatccaatcgga 1363
Query: 543 ggttgtctggtcaaaagcctgcaggag 569
|| || |||| | ||| ||||||||||
Sbjct: 1364 ggctgcctggcccaaaacctgcaggag 1390
Score = 129 bits (65), Expect = 2e-29
Identities = 92/101 (91%)
Strand = Plus / Plus
Query: 83 agggttacatcagatatgcctttgtatgatatactcaatgagtttcagaagggaagcagc 142
|||||| ||||| ||||||| || |||||||| || |||||||||||||||||||||||
Sbjct: 901 agggttccatcaaatatgccattatatgatatccttaatgagtttcagaagggaagcagt 960
Query: 143 catatggcagctgtagtgaaggttcatgcaaagagcaagaa 183
|| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 961 cacatggcagctgttgtgaaggttcatgcaaagagcaagaa 1001
Score = 69.9 bits (35), Expect = 2e-11
Identities = 107/131 (81%)
Strand = Plus / Plus
Query: 180 agaaattcaataatagcaaatttgccaatggagattctgagttaaacacacccttgttaa 239
||||||||||| | | ||||||||||||||| |||||| ||||||| |||| ||| | |
Sbjct: 1025 agaaattcaatgaaatcaaatttgccaatggggattctcagttaaatgcaccgttgctga 1084
Query: 240 acaagcatgatgataaatcagaaagtgtcatcattgacattgagaaagctgcaaggccta 299
||||||||||| ||||||||| | | | ||||| |||||||||||||||| ||||
Sbjct: 1085 ccaagcatgatggtaaatcagagcatctgctaattgatgttgagaaagctgcaagaccta 1144
Query: 300 ccacaatcaag 310
|||||||||
Sbjct: 1145 tgacaatcaag 1155
>29726.m003904 conserved hypothetical protein
Length = 1509
Score = 147 bits (74), Expect = 9e-35
Identities = 146/170 (85%)
Strand = Plus / Plus
Query: 365 tcagaggatattgaagatggggaagtcattggtattatcacattagaggatgtttttgaa 424
|||||||| |||||||| || ||||||||||||||||||||| | || ||||| ||||||
Sbjct: 1201 tcagaggacattgaagacggtgaagtcattggtattatcacactggaagatgtatttgaa 1260
Query: 425 gaacttctgcaagaggaaattgtggatgagacagatgtatatgtagatgtacataaaagg 484
|||||| |||| || |||||||||||||| ||||||| ||| || ||||| ||||||||
Sbjct: 1261 gaacttttgcaggaagaaattgtggatgaaacagatgaatacgttgatgtgcataaaaga 1320
Query: 485 attcgtgtggcagctgctgcagctgcttcttctgttgcacgagcaccatc 534
|| ||||| || ||||||||||||||||| || || ||||| || |||||
Sbjct: 1321 atccgtgttgctgctgctgcagctgcttcatcagtggcacgggctccatc 1370
Score = 65.9 bits (33), Expect = 3e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 84 gggttacatcagatatgcctttgtatgatatactcaatgagtttcagaagggaagcagcc 143
||||| |||| ||||||||| |||| ||||| || ||||||||||| || || ||||| |
Sbjct: 902 gggttccatctgatatgcctctgtacgatattctaaatgagtttcaaaaaggtagcagtc 961
Query: 144 atatggcagctgt 156
|||||||||||||
Sbjct: 962 atatggcagctgt 974