Jatropha Genome Database
- JcCA0264101.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0264101.20 - phase: 0 /pseudo/partial
(929 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29648.m002003 metal transporter, putative 323 1e-87
29648.m002004 metal transporter, putative 323 1e-87
29588.m000852 metal transporter, putative 54 2e-06
>29648.m002003 metal transporter, putative
Length = 1497
Score = 323 bits (163), Expect = 1e-87
Identities = 366/431 (84%), Gaps = 2/431 (0%)
Strand = Plus / Plus
Query: 238 tctgcttctttcttgcttcagaatgtgcttggaagatccagctcaactatatatgccatt 297
|||||||||||| | ||||||||||| | |||| ||| ||||| || | ||||| |||
Sbjct: 961 tctgcttctttccttcttcagaatgtattgggaaaatcaagctccacactctatgctatt 1020
Query: 298 gcattattagcttcagggcaaagctccaccatcacaggcacttatgctggccaatatata 357
|| |||||||| |||||||||||||| || || |||||||| ||||| || ||||||||
Sbjct: 1021 gccttattagcctcagggcaaagctctactataacaggcacatatgcaggacaatatatc 1080
Query: 358 atgcagggttttttggatcttaagatgaaaaaatggacaaggaacctaatgactaggtgt 417
||||||||||| |||||||| ||||||| |||||||| || |||||||||||||| |||
Sbjct: 1081 atgcagggtttcttggatctcaagatgagaaaatggattagaaacctaatgactagatgt 1140
Query: 418 attgccattgctcctagtcttgttgtctcaattattggtggatcttctggagcaggccga 477
|||||||||| ||||||||| |||||||||||||||||||||| |||||||| |||
Sbjct: 1141 gttgccattgcacctagtcttattgtctcaattattggtggatcacaaggagcaggtcga 1200
Query: 478 ctaatcatcattgcatcaatgatactttcatttgagcttccatttgcattaattcctctt 537
|||||||||||||||| |||||||| |||||||| ||||||||||| | || || |||
Sbjct: 1201 ttaatcatcattgcatcgatgatactctcatttgaacttccatttgctcttatccccctt 1260
Query: 538 ctcaaattcagcagcggttctaccaagatgggaccatataagaactcgatttatgttatt 597
||||||||||||||| | ||||||||||||||||| | |||||||| ||| | |||||
Sbjct: 1261 ctcaaattcagcagcagctctaccaagatgggaccgcacaagaactcaattattattatt 1320
Query: 598 gtaatttcatggactctagggttgatg-ataattggcataaatatatattatctaagcac 656
|| |||||||||| | | |||| | | || ||||||||||| |||||||| ||||||||
Sbjct: 1321 gtgatttcatgga-ttttgggtctaggaatcattggcataaacatatattacctaagcac 1379
Query: 657 aggctttgtgg 667
|||||||||||
Sbjct: 1380 aggctttgtgg 1390
>29648.m002004 metal transporter, putative
Length = 1587
Score = 323 bits (163), Expect = 1e-87
Identities = 421/507 (83%)
Strand = Plus / Plus
Query: 232 cttaactctgcttctttcttgcttcagaatgtgcttggaagatccagctcaactatatat 291
||||||||||| |||||| | || ||||||||||| |||| ||| ||||| | |||||
Sbjct: 916 cttaactctgcctctttccttctccagaatgtgctgggaaaatcaagctctatcttatat 975
Query: 292 gccattgcattattagcttcagggcaaagctccaccatcacaggcacttatgctggccaa 351
|| ||||| ||||||||||||||||||||||||| || |||| ||||||||||| |||
Sbjct: 976 gctattgccctattagcttcagggcaaagctccactatatcaggaacttatgctggacaa 1035
Query: 352 tatataatgcagggttttttggatcttaagatgaaaaaatggacaaggaacctaatgact 411
||||| ||||||||||| || ||| ||||||||| |||||||| ||| ||| ||||||||
Sbjct: 1036 tatatcatgcagggtttcttagatattaagatgagaaaatggataagaaacttaatgact 1095
Query: 412 aggtgtattgccattgctcctagtcttgttgtctcaattattggtggatcttctggagca 471
||||| ||||||||| | ||||||||| ||| |||||||||||||||||| ||||||
Sbjct: 1096 aggtgcattgccattacacctagtcttattgcctcaattattggtggatcacagggagca 1155
Query: 472 ggccgactaatcatcattgcatcaatgatactttcatttgagcttccatttgcattaatt 531
|| | ||||||||||||||||| |||||||| |||||||| ||||||||||| | ||
Sbjct: 1156 ggtcatctaatcatcattgcatcgatgatactctcatttgaacttccatttgctcttatc 1215
Query: 532 cctcttctcaaattcagcagcggttctaccaagatgggaccatataagaactcgatttat 591
|| ||||||||||| || ||| | || | |||||||| ||| | |||||||| |||| |
Sbjct: 1216 ccacttctcaaatttagtagcagctccataaagatgggtccacacaagaactcaattttt 1275
Query: 592 gttattgtaatttcatggactctagggttgatgataattggcataaatatatattatcta 651
|| |||||| | || |||| | | || || || ||||||||||| || ||||| |||
Sbjct: 1276 gtgattgtattctcgtggattttgggtctgggaatcattggcataaacatttattaccta 1335
Query: 652 agcacaggctttgtggattggctaattcacaataacctaccaaaagttgggaatgtgttc 711
|||||||||||||||| |||||||||| ||||| | ||||||||||||||||| ||||
Sbjct: 1336 agcacaggctttgtgggttggctaattgacaatgatctaccaaaagttgggaagctgttg 1395
Query: 712 attgggataatagtatttcctctaatg 738
|||||||| ||| ||||||||||||
Sbjct: 1396 attgggatcgcagtttttcctctaatg 1422
>29588.m000852 metal transporter, putative
Length = 1641
Score = 54.0 bits (27), Expect = 2e-06
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 478 ctaatcatcattgcatcaatgatactttcatttgagcttccatttgcattaattcctctt 537
||||| ||||||||||| ||||| ||||||||||| || || ||||| | ||||| |||
Sbjct: 1186 ctaattatcattgcatcgatgattctttcatttgaactgccttttgctcttattcccctt 1245
Query: 538 ctcaaattcagcagc 552
||||| |||| ||||
Sbjct: 1246 ctcaagttcaccagc 1260