Jatropha Genome Database
- JcCA0264101.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0264101.10 + phase: 0 /partial
(786 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29648.m002006 DNA binding protein, putative 648 0.0
>29648.m002006 DNA binding protein, putative
Length = 2316
Score = 648 bits (327), Expect = 0.0
Identities = 684/806 (84%), Gaps = 24/806 (2%)
Strand = Plus / Plus
Query: 1 gttgcgtttctggcctccgctgttggaccgagagttgctgcagcatgtgcccatgcatcg 60
||||| ||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 1504 gttgcctttctggcctctgctgttgggccaagagttgctgcagcttgtgcccatgcatcc 1563
Query: 61 ttggcggcattgtccgaggataaccggatgaattcagagagattacacagtagagaaggt 120
||||| |||||||| |||||| | ||||||||||||| ||| |||| ||||||||||
Sbjct: 1564 ttggcagcattgtcagaggatcataggatgaattcagaaagactacatggtagagaagga 1623
Query: 121 agttttcatggagaagttgcaaattcaatacaacagaaagaag----------------- 163
|||||||| |||||||||||||||||| | ||||| |||||||
Sbjct: 1624 agttttcagggagaagttgcaaattcagttcaacaaaaagaagacaaacccaatagttcc 1683
Query: 164 --ggc--agaatgaggcagagggtggtcctgtatctgcagataaagtcaaagctgctgca 219
||| |||| ||||||||||||| ||| ||||| |||| |||||||||||||||||
Sbjct: 1684 tgggctcagaacgaggcagagggtgcccctttatctacagagaaagtcaaagctgctgcg 1743
Query: 220 aaagctggtcttgcggctgcagcaactaaggcaaaactgtttgcagatcatgaagagcgg 279
|||||||||||| | || |||||||||||||| |||||||||||||||||||||||| |
Sbjct: 1744 aaagctggtctttctgcagcagcaactaaggctaaactgtttgcagatcatgaagagaga 1803
Query: 280 gaaattcaaaggctatctgccaatatcattaatcatcagctgaagaggttggagctgaag 339
||||||||||| |||||||| |||||||||||||| ||| ||||||| |||||| |||||
Sbjct: 1804 gaaattcaaagactatctgctaatatcattaatcaccagttgaagagattggagttgaag 1863
Query: 340 ttgaagcagtttgcggaagtggaaacttttctaatgagagagtgtgaacaagtggagaag 399
||||||||||||| || ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 1864 ctgaagcagtttgcagaggtggagacctttctaatgagagagtgtgaacaagtggagaag 1923
Query: 400 acgaggcagaggtttgcagctgagagggctcgcatgatgtcaacccggattggacctgct 459
||||||||||||||||| |||||| | || ||||| |||| ||||||||||||||||||
Sbjct: 1924 acgaggcagaggtttgctgctgagcgtgcccgcattctgtctacccggattggacctgct 1983
Query: 460 gggtctacttcacaaatgaatctggcaggtgttggtccttccatggttaacaataacatc 519
||| ||||||||||||||| | ||||||||||| ||||||||||| ||| ||||||||
Sbjct: 1984 ggggctacttcacaaatgagtttggcaggtgttactccttccatgggtaataataacatt 2043
Query: 520 agcagcaataggcaacaagtgatgcctccc---tcctcgcaaccaaatatttcgggatat 576
|||||| |||||||||||| |||||| || || || ||||||| ||||| ||||||
Sbjct: 2044 ggcagcagtaggcaacaagtcatgcctacctcatcttcacaaccaagcatttcaggatat 2103
Query: 577 ggcaacaatcaacaagtgcatccacacgtgtcatttatgcaacggggacaacaacagcca 636
||||||||||||||||| ||||| ||| |||||||||||||||||||||||| || |||
Sbjct: 2104 ggcaacaatcaacaagtccatccccacatgtcatttatgcaacggggacaaccgcaacca 2163
Query: 637 atgtttcctctagggccaaggctccctttagcagctatacaaccatcctcatctgctcca 696
|||||||| | || || || || || ||||||||||||||||||| ||||||||||||
Sbjct: 2164 atgtttccggtgggcccgagactgcccctagcagctatacaaccatcatcatctgctcca 2223
Query: 697 tcaaatgttatgttcaatgcctctgggagttctcagccaagtcttaatcaaatgctgagg 756
|||||| | |||| ||| |||||||| | ||| ||||| ||||| ||||||||||||||
Sbjct: 2224 tcaaatatcatgtacaacgcctctggaaattcacagcccagtctcaatcaaatgctgaga 2283
Query: 757 tccgtgtcggggcctagctctagttt 782
|| || || |||||||||||| ||||
Sbjct: 2284 tctgtatcagggcctagctctggttt 2309