Jatropha Genome Database
- JcCA0261101.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0261101.10 - phase: 0 /partial
(1426 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29889.m003377 neurobeachin, putative 737 0.0
>29889.m003377 neurobeachin, putative
Length = 4728
Score = 737 bits (372), Expect = 0.0
Identities = 927/1112 (83%)
Strand = Plus / Plus
Query: 315 agtagagagtgagacacctcttctttctgaaactgcttatttacaagcattagaagaaac 374
||||||| || ||||||||| ||||| | || || |||||||| || |||||||||| |
Sbjct: 1818 agtagagggtaagacacctcctctttttcaagcttcttatttagaaaaattagaagaagc 1877
Query: 375 atctggattttctgaacatgctggtcacttgagtccacagtattattatgatgcagaaaa 434
||||| ||||||||||||||| ||| |||||||| ||||||| |||||| || |||
Sbjct: 1878 atctgctttttctgaacatgctactcatttgagtcctcagtattgctatgatccaaaaag 1937
Query: 435 ccttgtgaaggacatgttttcaggtgatgaatcagtcaatgaaagtattgagaaaagtgt 494
| || ||||| || | || | ||| ||||||| ||| |||| ||| ||||| |
Sbjct: 1938 cattaagaaggttatctgttttgctgaagaatcagcagttgagagtagtgataaaagcat 1997
Query: 495 atctaagccacttgaaattggtaaaaactatgggttgcaatgtaatattaatttaagtta 554
| |||||||| |||| | ||||| | |||| |||| || | || ||||||| |||||
Sbjct: 1998 ctataagccacccgaaactattaaaagccatggattgccatctgatgttaatttgagtta 2057
Query: 555 tcttcttgagcatatggaggtggaggttgaaaataccatgggataccaagaattacagca 614
||||||||||||||| |||||||| ||||| | |||| ||||||||||| || ||
Sbjct: 2058 tcttcttgagcatattgaggtggatattgaaggttccataggataccaagagttcttgct 2117
Query: 615 ttggaggcgacaaccgtcttattcaaagaactctaaagaagatttttcgaaggacatttt 674
|||||| | | |||| || ||||||| || | | ||||||||| |||||||||| ||
Sbjct: 2118 ttggagacaaaaaccatcatattcaagtaaattttctgaagattttgcgaaggacatgtt 2177
Query: 675 tgctattggatctgttttagcggaactttatttgaagaggccactcttcaattcaacctc 734
| || |||| | ||| || ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2178 ttctgttggttgtgtcttggcggaactttatttgaagaagccactcttcaattcaacctc 2237
Query: 735 attagctacctatattgaacgagatatattacctgaattcttccaggaacttcctcctca 794
||||||||| |||| |||| | | | | |||||||||| | | | |||||||||||| ||
Sbjct: 2238 attagctacatatactgaaagtggtgttttacctgaatccatgctggaacttcctcccca 2297
Query: 795 tgctaaagttctcgttgaagcctgcatccaaaaggattggagacggaggccatcagccaa 854
|||||||||||| ||||||||||||||||| ||||| ||| |||| || || |||||
Sbjct: 2298 tgctaaagttctagttgaagcctgcatccagaaggaatgggataggagaccgtcggccaa 2357
Query: 855 aagtctactggagtcaccttattttcccacaacagtcaagtcatcctacatgtttattgc 914
| || | ||||| ||||||||||||||| ||||||||| || ||||| ||||||||||
Sbjct: 2358 atgtgttctggaatcaccttattttcccgcaacagtcagatcgtcctatttgtttattgc 2417
Query: 915 accacttcagcttatagcaagcaatggatcccgtcttcaatatgctgcaaattttgcaaa 974
||| || |||||| |||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 2418 accgctgcagcttctagcaaatgatggatctcgtcttcaatatgctgcaaattttgcaaa 2477
Query: 975 acaaggagccctgaaagcaatgggaagctttgcagctgaaatgtgtttaccctattgtat 1034
|||||||||||||||||||||||| |||||||||||||||||| |||| |||| |
Sbjct: 2478 acaaggagccctgaaagcaatgggtgcatttgcagctgaaatgtgtgcccccttttgttt 2537
Query: 1035 accccttgtagtgaatcctcagtctgatactgaggctgaatgggcttatacactgctgaa 1094
||| |||||||| || |||||| ||||||||| ||||||||||||||| ||||||||
Sbjct: 2538 acctcttgtagtaaacactcagtttgatactgaagctgaatgggcttatgttctgctgaa 2597
Query: 1095 agaattcataaaatgtttgacacctaaagcagtaaagatggcagtcttgccagctattca 1154
|||||| ||||||||||||||||| || ||||| |||| ||||||||||| || ||
Sbjct: 2598 agaatttataaaatgtttgacaccaaaggcagtgaagaaattggtcttgccagccatcca 2657
Query: 1155 gaagattctgcaggctaggtattcacatttgaaggtatcacttctccaaggttcatttgt 1214
||||||||| |||||||| ||||||||||| ||||||| |||||||||||||| |||||
Sbjct: 2658 gaagattctacaggctagttattcacatttaaaggtattgcttctccaaggttcgtttgt 2717
Query: 1215 gcaagagatgtggaacctcattggtaaacaagtttatttggaaaacatacatcctttagt 1274
||||||||| ||||| ||||| |||||||||| |||||||||| ||||||||||||||
Sbjct: 2718 gcaagagatttggaatctcatgggtaaacaagcatatttggaaacaatacatcctttagt 2777
Query: 1275 tatatcaaatttgcatgttgctcctcataagagttcagctgctgttgcttctgtgcttct 1334
|||||||||| || || ||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 2778 tatatcaaatctgtatattgctcctcataagagttcagctgctgttgcttctgttctgct 2837
Query: 1335 gatcggcacaagtgaagagcttggtgtacctattactgttcatcagacaatcttgccttt 1394
||| || ||||||||||| || ||||||||||| || || ||||||||||||||||||
Sbjct: 2838 gattggtacaagtgaagaactcggtgtacctatcacagtcagtcagacaatcttgccttt 2897
Query: 1395 gattcactgctttgggaaaggactctgtcctg 1426
||||||||||||||||||||||||||||||||
Sbjct: 2898 gattcactgctttgggaaaggactctgtcctg 2929
Score = 315 bits (159), Expect = 4e-85
Identities = 225/247 (91%)
Strand = Plus / Plus
Query: 8 atctggcagtaccttcatgggcaagtagtccagaggagttcattaaactgcatcgtgatg 67
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 1538 atctggcagtaccatcatgggcaggtagtccagaggagttcattaaactgcatcgagatg 1597
Query: 68 ctttagaaagtgagcgggtctcttgtcaaattcatcactggattgacattacctttggct 127
| ||||||||||||| || || | ||||||||||||||||||||||||||||||||||
Sbjct: 1598 ccttagaaagtgagcatgtttcaagccaaattcatcactggattgacattacctttggct 1657
Query: 128 acaaaatgtctggacaggcagctgtggctgccaagaatgttatgttgccttcatcagagc 187
||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| |
Sbjct: 1658 acaaaatgtctggacaggcagctgtggctgcaaagaacgttatgctgccttcatcagaac 1717
Query: 188 ccacaatgcctcggcctgtaggacgtcgtcagctctttactcggccacatcctgtacgtc 247
||| ||||| || | |||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 1718 ccatgatgccaaggtcagtaggacgtcgtcagctctttactcgaccacatcctgcacgtc 1777
Query: 248 taggttc 254
|||||||
Sbjct: 1778 taggttc 1784