Jatropha Genome Database
- JcCA0261081.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0261081.10 - phase: 0 /pseudo/partial
(844 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30128.m008993 flap endonuclease-1, putative 617 e-176
>30128.m008993 flap endonuclease-1, putative
Length = 1038
Score = 617 bits (311), Expect = e-176
Identities = 446/491 (90%)
Strand = Plus / Plus
Query: 70 agttactcaaggagggcagacgctaccgaggatttggctcaagctttggagactggcatc 129
|||||||||||||||||||| ||||| ||||| |||||| |||| |||||||||| |
Sbjct: 187 agttactcaaggagggcagatgctactgaggaattggctgcagctgtggagactggtaat 246
Query: 130 aaggaagacattgagaaatatagtaagcgaactgtgaaggtgacaaagcagcacaatgaa 189
|||||||||||||| |||| |||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 247 aaggaagacattgaaaaattcagtaagcggactgtgaaggtgacaaaacagcataatgaa 306
Query: 190 gactgcaaaagacttttaagactcatgggtgtacccgtaattgaggctccttcagaagca 249
||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||
Sbjct: 307 gactgcaaaagacttttaagactaatgggagtacctgtaattgaggctccttctgaagca 366
Query: 250 gaggcacagtgtgcagcgctttgtaaatcaggaaaggtttatgctgtagcttctgaggat 309
|||||| ||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 367 gaggcagagtgtgctgcactttgcaaatcaggaaaggtttatgctgtagcttctgaggac 426
Query: 310 atggattccttaacttttggagctcctaggtttcttcgccatttgatggatccgagctcg 369
|||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 427 atggattccttaacttttggagctcctaggtttcttcgtcatttgatggatcccagctca 486
Query: 370 agaaaaatccctgttatggaatttgaaattaaaaagattttggaggagctgaaccttaac 429
|||||| |||| |||||||||||||||| | |||||||||||||||||||||||||| |
Sbjct: 487 agaaaagtcccagttatggaatttgaaacttcaaagattttggaggagctgaaccttacc 546
Query: 430 atggatcaattcattgacctctgcatcctttctggatgtgattattgcgacagcattcga 489
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 547 atggatcaatttattgacctctgcatcctttctggatgtgattattgtgacagcattcga 606
Query: 490 ggaattggaggactgactgccttgaagctcatccgtcaacatggctgtatagaaactata 549
||||||||||| |||||||||||||||| || ||||| ||||||| ||||| | |||
Sbjct: 607 ggaattggaggcatgactgccttgaagcttattcgtcagcatggctccatagagaatatt 666
Query: 550 ttggagaacat 560
|||||||||||
Sbjct: 667 ttggagaacat 677
Score = 190 bits (96), Expect = 9e-48
Identities = 153/172 (88%)
Strand = Plus / Plus
Query: 594 taccaaataccagatgactggccatatcaagaggctcgacggctttttaaagaaccactt 653
|||||||||||||| || ||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 691 taccaaataccagaggattggccatatcaggaggctcggcggctttttaaggaaccactt 750
Query: 654 gtcctcactgatggagaggagcctgagattaagtggactgcgccagatgaagagggtttg 713
||||| |||||| |||||| |||||| ||||||||||||| |||||| ||||||| ||
Sbjct: 751 gtccttgctgatgaagaggaacctgagcttaagtggactgccccagatcaagaggggctg 810
Query: 714 attgcttttctagtaaatgaaaatgggttcaatagtgatcgggtgacaaagg 765
|| ||||||| || ||||||||||||||||||| |||||||||||||||||
Sbjct: 811 ataacttttctggtgaatgaaaatgggttcaataatgatcgggtgacaaagg 862