Jatropha Genome Database

JcCA0259681.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0259681.10 + phase: 0 /partial
         (399 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29593.m000174 conserved hypothetical protein                          321   2e-87

>29593.m000174 conserved hypothetical protein
          Length = 1503

 Score =  321 bits (162), Expect = 2e-87
 Identities = 213/230 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtgcccataacattattgggcaaagtgaagcttggtattctaccagctccctagcc 60
           ||||||||||||||||  |||||||||| |||||||||||||||||| | ||   || ||
Sbjct: 280 atgggtgcccataacacaattgggcaaactgaagcttggtattctacaaactatttaacc 339

                                                                       
Query: 61  aagcgttatagattcgagagtgcaagcaatttgcctatatatccacagaggccaggagag 120
           ||||||| |||||||||||||||||||||||   |||||||||||||||| |||||||||
Sbjct: 340 aagcgttctagattcgagagtgcaagcaattactctatatatccacagagaccaggagag 399

                                                                       
Query: 121 aaggattgcgcccactatatgctcacacgaacctgtaaatttggagatagctgcaagttt 180
           |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 400 aaggattgtgcccactatatgctcactcgtacctgtaaatttggagatagctgcaagttt 459

                                                             
Query: 181 gaccatcctgtttgggttcctgagggtggaatcccaaattggaaagaggt 230
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gaccatcctgtttgggttcctgagggtggaatcccaaattggaaagaggt 509