Jatropha Genome Database
- JcCA0259301.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0259301.10 + phase: 0 /partial
(1097 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30076.m004699 importin alpha, putative 1275 0.0
30128.m008884 importin alpha, putative 406 e-112
29889.m003249 importin alpha, putative 196 2e-49
29889.m003336 importin alpha, putative 125 6e-28
30128.m008927 importin alpha, putative 100 3e-20
>30076.m004699 importin alpha, putative
Length = 1365
Score = 1275 bits (643), Expect = 0.0
Identities = 980/1097 (89%)
Strand = Plus / Plus
Query: 1 tttgaggcggcatgggctctcacaaatattgcttctggaacatcagagaataccagggtc 60
|||||||| || |||||||| ||||||||||| ||||| ||||| || ||||||| |||
Sbjct: 172 tttgaggctgcgtgggctcttacaaatattgcctctggcacatccgaaaataccaaggtt 231
Query: 61 gtaattgatcatggggccgtcccaatatttgttaagcttttaagttcgccaactgatgat 120
||||||||||||||||| ||||| || ||| |||||||||||||||||||||||||||||
Sbjct: 232 gtaattgatcatggggctgtccctatttttattaagcttttaagttcgccaactgatgat 291
Query: 121 gttagggaacaggctgtttgggcattaggaaatattgctggtgactcaccaaaatgtcgg 180
|| |||||||||||||| |||||||||||||||||||||||||| ||||| || |||||
Sbjct: 292 gtcagggaacaggctgtctgggcattaggaaatattgctggtgattcacctaagtgtcgc 351
Query: 181 gatcttgtccttggtcatggggccttgatgccattgctcgcacagttcaatgaacatgca 240
||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 352 gattttgtccttggccatggggccttgatgccattgcttgcacagttcaatgaacatgca 411
Query: 241 aagctttctatgttgagaaatgcaacgtggactttatctaacttctgcaggggcaagcca 300
|||||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||
Sbjct: 412 aagctttctatgttgagaaatgcaacttggacgttatctaacttttgcaggggaaagcca 471
Query: 301 caacctttatttgagcagacaaagcctgccctcccagctcttgagcgtcttatacattca 360
||||||| ||||||||||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 472 caaccttcatttgagcagacaaagcctgctctcccagctcttgaacgccttatacattca 531
Query: 361 aacgatgaggaagttttgacagatgcatgctgggcactttcgtatctctcagatggaacc 420
|| || ||||||||| | |||||||||||||||||| | || ||||||||||| ||||||
Sbjct: 532 aatgacgaggaagttcttacagatgcatgctgggcattgtcttatctctcagacggaacc 591
Query: 421 aatgacaaaattcaagctgttattgaggcaggggtctgccccaggcttgttgaactttta 480
||||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||
Sbjct: 592 aatgacaaaatccaagctgttattgaggcaggtgtctgccctcgacttgttgaactttta 651
Query: 481 ctccatccatctccaacagtgctcatacctgctctacgtacaattggaaatattgtcact 540
|| |||||||||||||| ||||| || ||||||||||||||| ||||||||||||| |||
Sbjct: 652 cttcatccatctccaacggtgctgattcctgctctacgtacagttggaaatattgttact 711
Query: 541 ggtgacgacatgcagactcagtgtataataaaccatcaagctcttccgtgccttttgaat 600
||||| || |||||||| |||||||| |||||||||||||| ||||| || ||||||||
Sbjct: 712 ggtgatgatatgcagacacagtgtatgataaaccatcaagcgcttccatgtcttttgaac 771
Query: 601 ctcctgacacataattataagaagagcatcaagaaggaagcatgctggacaatctcaaac 660
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 772 ctcctgacacataattataagaagagcatcaagaaagaagcttgctggacaatctcaaac 831
Query: 661 atcacagctggaaatgtaaatcaaatacaggccataattgatgctggtattatcggtccg 720
|| ||||||||||||||||||||||| ||||| ||||||||||| | | | ||||||||
Sbjct: 832 attacagctggaaatgtaaatcaaattcaggctataattgatgccgatctcatcggtcct 891
Query: 721 cttgttcaactgctccagattgctgaatttgagatnnnnnnngaggctgcatgggcaatt 780
|| ||||||| || |||||||||||||||||||| |||||||| |||||||||
Sbjct: 892 ctcattcaactacttcagattgctgaatttgagattaagaaagaggctgcttgggcaatt 951
Query: 781 tcaaatgctacttctggtggctcacatgaacaaatcaagttcttggtgagccaagggtgt 840
||||||||||||||||||||| | |||||||||||||||| |||||||||||| |||||
Sbjct: 952 tcaaatgctacttctggtggcacccatgaacaaatcaagtacttggtgagccaggggtgc 1011
Query: 841 attaagccattgtgtgatctcctgatttgtcctgacccaaggattgtaacagtttgcttg 900
|| || ||||||||||||||||| || || |||||||| ||||| || ||||||||||||
Sbjct: 1012 atcaaaccattgtgtgatctcctaatctgccctgaccccaggatagtgacagtttgcttg 1071
Query: 901 gaagggcttgagaacattttaaaggttggtgaagctgnnnnnnntttgggcaacagtgga 960
|||||||||||||||||| | |||||||| ||||||| ||||||||||| ||||
Sbjct: 1072 gaagggcttgagaacattctgaaggttggcgaagctgagaaaaatttgggcaacactgga 1131
Query: 961 gaaacaaatctgtatgcccaattgattgatgacgcagaggggttagaaaagattgaaaac 1020
|| ||||| ||||||||||| |||||||||| || ||||| |||||||||||||| ||
Sbjct: 1132 gatgcaaatttgtatgcccaaatgattgatgaagctgagggattagaaaagattgagaat 1191
Query: 1021 cttcagagtcatgacaaccatgacatatatgaaaaagcagtgaagattcttgagacttat 1080
|||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 1192 cttcagagtcatgacaacaatgacatatatgagaaagcagtgaagattctcgagacgtac 1251
Query: 1081 tggctggaggaggatga 1097
|||||||||||||||||
Sbjct: 1252 tggctggaggaggatga 1268
>30128.m008884 importin alpha, putative
Length = 1596
Score = 406 bits (205), Expect = e-112
Identities = 746/926 (80%), Gaps = 2/926 (0%)
Strand = Plus / Plus
Query: 13 tgggctctcacaaatattgcttctggaacatcagagaataccagggtcgtaattgatcat 72
|||||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||||||||
Sbjct: 412 tgggctctgacaaacattgcctctgggacatctgagaatacgagggtggtaattgatcat 471
Query: 73 ggggccgtcccaatatttgttaagcttttaagttcgccaactgatgatgttagggaacag 132
|| || ||||| |||||||| |||||| | ||| |||| |||||||||| | ||||||
Sbjct: 472 ggagctgtccctatatttgtaaagcttcttgcttctccaagtgatgatgttcgtgaacag 531
Query: 133 gctgtttgggcattaggaaatattgctggtgactcaccaaaatgtcgggatcttgtcctt 192
|||||||||||| | |||||| |||||||||| || || |||||||| ||||| ||||||
Sbjct: 532 gctgtttgggcactgggaaatgttgctggtgattctcctaaatgtcgtgatctggtcctt 591
Query: 193 ggtcatggggccttgatgccattgctcgcacagttcaatgaacatgcaaagctttctatg 252
|| |||| || ||| | || || || |||||||| ||||| ||||| || |||||||||
Sbjct: 592 ggcaatggagcattgcttcctttactggcacagttgaatgagcatgctaaactttctatg 651
Query: 253 ttgagaaatgcaacgtggactttatctaacttctgcaggggcaagccacaacctttattt 312
|||| ||||| || ||||| | || ||||| ||| | |||||||||||||| || |||
Sbjct: 652 ctgaggaatgctacatggacactctcaaacttttgccgaggcaagccacaaccatttttt 711
Query: 313 gagcagacaaagcctgccctcccagctcttgagcgtcttatacattcaaacgatgaggaa 372
|||||| |||||||| || ||||| |||| ||||| || ||||| || ||||| |||
Sbjct: 712 gagcaggttaagcctgcacttccagcccttgcacgtctaattcattctaatgatgaagaa 771
Query: 373 gttttgacagatgcatgctgggcactttcgtatctctcagatggaaccaatgacaaaatt 432
|||||||| |||||||| ||||| || |||||||| || ||||| |||||||||||||||
Sbjct: 772 gttttgactgatgcatgttgggcgctctcgtatctttctgatggcaccaatgacaaaatt 831
Query: 433 caagctgttattgaggcaggggtctgccccaggcttgttgaacttttactccatccatct 492
|||||||||||||| ||||| || ||||| |||| |||||||||||||| || ||||||
Sbjct: 832 caagctgttattgaagcaggagtgtgccctcggctagttgaacttttactgcacccatct 891
Query: 493 ccaacagtgctcatacctgctctacgtacaattggaaatattgtcactggtgacgacatg 552
||| |||| ||||| ||||| || || || |||| |||||||||||||| || || |||
Sbjct: 892 ccatcagttctcattcctgcccttcgcactgttgggaatattgtcactggcgatgatatg 951
Query: 553 cagactcagtgtataataaaccatcaagctcttccgtgccttttgaatctcctgacacat 612
||||| |||||||| || || |||||||| || || |||||| ||||| | ||||| ||
Sbjct: 952 cagacacagtgtattatcaatcatcaagcactgccctgccttctgaatttgttgacaaat 1011
Query: 613 aattataagaagagcatcaagaaggaagcatgctggacaatctcaaacatcacagctgga 672
|| ||||| ||||| |||||||||||||| || ||||| ||||| || || ||||||||
Sbjct: 1012 aactataaaaagagtatcaagaaggaagcttgttggaccatctctaatataacagctggc 1071
Query: 673 aatgtaaatcaaatacaggccataattgatgctggtattatcggtccgcttgttcaactg 732
|| | || || ||||| ||||||| || |||||| ||||| | ||||| ||
Sbjct: 1072 aacaaggagcagattcaggctgtaattgaggcaaatattattggtccattggttcatttg 1131
Query: 733 ctccagattgctgaatttgagatnnnnnnngaggctgcatgggcaatttcaaatgctact 792
|| | | ||||||||| || || |||||||| ||||| || |||||||||||
Sbjct: 1132 cttgaaaatgctgaattcgacattaagaaagaggctgcttgggcgatctcaaatgctaca 1191
Query: 793 tctggtggctcacatgaacaaatcaagt-tcttggtgagccaagggtgtattaagccatt 851
|||||||| | ||||| |||||||| | |||| || ||||||||||| || ||||| ||
Sbjct: 1192 tctggtggtactcatgatcaaatcaaatatctt-gttagccaagggtgcatcaagccctt 1250
Query: 852 gtgtgatctcctgatttgtcctgacccaaggattgtaacagtttgcttggaagggcttga 911
|||||| || || || || ||||| ||||||||||| || || ||||| ||||| || ||
Sbjct: 1251 gtgtgaccttctcatctgccctgatccaaggattgtgactgtctgcttagaaggtctgga 1310
Query: 912 gaacattttaaaggttggtgaagctg 937
||||| || ||||| || |||||||
Sbjct: 1311 aaacatattgaaggtaggggaagctg 1336
>29889.m003249 importin alpha, putative
Length = 1467
Score = 196 bits (99), Expect = 2e-49
Identities = 272/332 (81%)
Strand = Plus / Plus
Query: 766 gctgcatgggcaatttcaaatgctacttctggtggctcacatgaacaaatcaagttcttg 825
||||| ||||||||||| |||||||||||||| || | ||||| ||||| |||| | ||
Sbjct: 1042 gctgcttgggcaatttccaatgctacttctggcggtactcatgagcaaattaagtacatg 1101
Query: 826 gtgagccaagggtgtattaagccattgtgtgatctcctgatttgtcctgacccaaggatt 885
||||| |||||||| || || |||||||||||||| || | ||||| || |||||||||
Sbjct: 1102 gtgagtcaagggtgcataaaaccattgtgtgatcttcttgtatgtcccgatccaaggatt 1161
Query: 886 gtaacagtttgcttggaagggcttgagaacattttaaaggttggtgaagctgnnnnnnnt 945
|| || || || |||||||| | ||||||||| | |||||||||||||||| |
Sbjct: 1162 gtcactgtgtgtctggaagggttggagaacattcttaaggttggtgaagctgaaaagaat 1221
Query: 946 ttgggcaacagtggagaaacaaatctgtatgcccaattgattgatgacgcagaggggtta 1005
||||| ||||||||||| ||||| ||||| || ||||| ||||| || ||||| |||
Sbjct: 1222 ttggggaacagtggagatgttaatctatatgcacagttgatagatgatgcggagggatta 1281
Query: 1006 gaaaagattgaaaaccttcagagtcatgacaaccatgacatatatgaaaaagcagtgaag 1065
|||||||||||||| || |||||||||||||| |||| || ||||| || |||||||||
Sbjct: 1282 gaaaagattgaaaatctacagagtcatgacaataatgagatctatgagaaggcagtgaag 1341
Query: 1066 attcttgagacttattggctggaggaggatga 1097
|||||||||| |||||| ||||||| |||||
Sbjct: 1342 gttcttgagacatattggttggaggaagatga 1373
Score = 176 bits (89), Expect = 2e-43
Identities = 422/533 (79%)
Strand = Plus / Plus
Query: 4 gaggcggcatgggctctcacaaatattgcttctggaacatcagagaataccagggtcgta 63
||||| || ||||| || ||||| ||||| || || || ||||| || || ||||| ||
Sbjct: 409 gaggctgcttgggcgctgacaaacattgcctcggggacctcagaaaacacaagggtggtt 468
Query: 64 attgatcatggggccgtcccaatatttgttaagcttttaagttcgccaactgatgatgtt 123
||||||||||| || || ||||||||||| |||||| | ||| || | ||||||||||
Sbjct: 469 attgatcatggtgcagttccaatatttgtaaagcttcttgcttctcccagtgatgatgtt 528
Query: 124 agggaacaggctgtttgggcattaggaaatattgctggtgactcaccaaaatgtcgggat 183
|||| |||||||| |||||||| || ||| |||||||||| || ||||||||||| |||
Sbjct: 529 cgggagcaggctgtgtgggcattgggcaatgttgctggtgattctccaaaatgtcgtgat 588
Query: 184 cttgtccttggtcatggggccttgatgccattgctcgcacagttcaatgaacatgcaaag 243
||||| || | | || || | | |||||| | |||||| | ||||| |||||||||
Sbjct: 589 cttgttctcagcaacggagcgctccttccattgttggcacagctgaatgagcatgcaaag 648
Query: 244 ctttctatgttgagaaatgcaacgtggactttatctaacttctgcaggggcaagccacaa 303
||||| |||||| | || || || ||||| |||| ||||| || ||||||||||||||
Sbjct: 649 ctttcaatgttgcggaacgctacctggaccctatcaaacttttgtaggggcaagccacag 708
Query: 304 cctttatttgagcagacaaagcctgccctcccagctcttgagcgtcttatacattcaaac 363
||| ||||||||| | |||||| || ||||| ||||| |||||| | |||||||
Sbjct: 709 cctccgtttgagcaggtgaggcctgcacttccagcacttgaacgtcttgtgcattcaact 768
Query: 364 gatgaggaagttttgacagatgcatgctgggcactttcgtatctctcagatggaaccaat 423
|| || ||||| | || ||||| || ||||||||||| ||||| || ||||| || |||
Sbjct: 769 gacgatgaagtcctaaccgatgcttgttgggcactttcatatctttctgatggtacaaat 828
Query: 424 gacaaaattcaagctgttattgaggcaggggtctgccccaggcttgttgaacttttactc 483
|| ||||| |||||||| ||||||||||| ||||| ||||| ||||||||||| | ||
Sbjct: 829 gataaaatccaagctgtgattgaggcaggagtctgtcccagacttgttgaactcctcctg 888
Query: 484 catccatctccaacagtgctcatacctgctctacgtacaattggaaatattgt 536
|| ||||||| ||||||| | ||||| || |||||| |||||||||||||
Sbjct: 889 cactcatctccttcagtgcttgtccctgcccttcgtacagttggaaatattgt 941
>29889.m003336 importin alpha, putative
Length = 1362
Score = 125 bits (63), Expect = 6e-28
Identities = 270/339 (79%)
Strand = Plus / Plus
Query: 114 tgatgatgttagggaacaggctgtttgggcattaggaaatattgctggtgactcaccaaa 173
|||||||||| |||||||||| || |||||||| || ||| ||||||||||||| || |
Sbjct: 285 tgatgatgttcgggaacaggcagtgtgggcattgggtaatgttgctggtgactcgcctag 344
Query: 174 atgtcgggatcttgtccttggtcatggggccttgatgccattgctcgcacagttcaatga 233
|| |||||||||| ||| |||||| || | |||||||| || ||||| ||||||||
Sbjct: 345 ttgcagggatcttgttcttaatcatggtgcactaatgccattacttgcacaattcaatga 404
Query: 234 acatgcaaagctttctatgttgagaaatgcaacgtggactttatctaacttctgcagggg 293
|| |||| ||||| ||| | || ||||| || ||||||||||| || |||||| | ||
Sbjct: 405 gcactcaaaactttcaatgctaaggaatgctacttggactttatcgaatttctgccgcgg 464
Query: 294 caagccacaacctttatttgagcagacaaagcctgccctcccagctcttgagcgtcttat 353
||||||| | || |||||||||| |||||||| | || || ||| ||| |||||
Sbjct: 465 aaagccaccagctccatttgagcaggtcaagcctgcattgcccgcccttcagcaccttat 524
Query: 354 acattcaaacgatgaggaagttttgacagatgcatgctgggcactttcgtatctctcaga 413
| |||| ||||| ||||| || |||||||| || ||||||||||| ||||| || ||
Sbjct: 525 ttactcaactgatgatgaagtgttaacagatgcctgttgggcactttcttatctttctga 584
Query: 414 tggaaccaatgacaaaattcaagctgttattgaggcagg 452
||| || |||||||| ||||| |||||||||||||||||
Sbjct: 585 tggcacaaatgacaagattcaggctgttattgaggcagg 623
>30128.m008927 importin alpha, putative
Length = 1353
Score = 99.6 bits (50), Expect = 3e-20
Identities = 140/170 (82%)
Strand = Plus / Plus
Query: 766 gctgcatgggcaatttcaaatgctacttctggtggctcacatgaacaaatcaagttcttg 825
||||||||||| || |||||||| |||||||| || || |||||||| || | |||||
Sbjct: 931 gctgcatgggctatctcaaatgcgacttctggaggatcgcatgaacagattcaattctta 990
Query: 826 gtgagccaagggtgtattaagccattgtgtgatctcctgatttgtcctgacccaaggatt 885
|||| |||||| || |||||||| | |||||||| || || ||||| ||||| ||||||
Sbjct: 991 gtgaaccaaggttgcattaagcccctctgtgatcttctaatatgtccagaccccaggatt 1050
Query: 886 gtaacagtttgcttggaagggcttgagaacattttaaaggttggtgaagc 935
|| || |||||| | || ||||| ||||||||| ||||||| ||||||||
Sbjct: 1051 gtgacggtttgcctcgaggggctggagaacattctaaaggtgggtgaagc 1100
Score = 83.8 bits (42), Expect = 2e-15
Identities = 150/186 (80%)
Strand = Plus / Plus
Query: 114 tgatgatgttagggaacaggctgtttgggcattaggaaatattgctggtgactcaccaaa 173
||||||||| || || ||||| || |||||||| || ||| ||||||||||||||||||
Sbjct: 522 tgatgatgtcagagagcaggcagtatgggcattgggcaatgttgctggtgactcaccaag 581
Query: 174 atgtcgggatcttgtccttggtcatggggccttgatgccattgctcgcacagttcaatga 233
|| |||||||||| ||||| |||||||| |||||||||| || | ||||| |||||
Sbjct: 582 ttgcagggatcttgttcttgggcatggggctctgatgccattactagttcagttaaatga 641
Query: 234 acatgcaaagctttctatgttgagaaatgcaacgtggactttatctaacttctgcagggg 293
||| |||| || || ||| || | ||||| || ||||| || || ||||||||| | ||
Sbjct: 642 acactcaaaactatccatgctgcggaatgctacttggacattgtccaacttctgccgtgg 701
Query: 294 caagcc 299
||||||
Sbjct: 702 caagcc 707