Jatropha Genome Database

JcCA0258941.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0258941.10 + phase: 0 
         (396 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29577.m000452 strictosidine synthase, putative                        260   6e-69
28094.m000178 strictosidine synthase, putative                         54   6e-07

>29577.m000452 strictosidine synthase, putative
          Length = 1119

 Score =  260 bits (131), Expect = 6e-69
 Identities = 329/395 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgaaatactggctagaaggtccaagaacaggaagagtggaagttgtagctgacttacca 60
            |||||||||||| |||| ||||||| ||| ||||  |||||| |||||||  || |||||
Sbjct: 724  atgaaatactggatagagggtccaaaaactggaaacgtggaacttgtagcaaacctacca 783

                                                                        
Query: 61   ggttttccagacaatgtaagattaaatgaaaaaggtcagttttgggtagcaatagattgt 120
            || || ||||||||| | ||| ||||||| ||||| || |  ||||||||||||||||||
Sbjct: 784  ggattcccagacaatatcagagtaaatgacaaagggcattactgggtagcaatagattgt 843

                                                                        
Query: 121  tgcaggactcaagcacaagaaattctttcacacaatccatggatcaggaacttctatttc 180
            |||||||||| |||||| || || ||| |||||||||||||||| || | | | || |||
Sbjct: 844  tgcaggactcgagcacaggagatccttacacacaatccatggattagaagcgtatacttc 903

                                                                        
Query: 181  cggttaccagtcaaaatgagcttgttagcaagaatgatgggaatgaaaatgtacacagta 240
             | |||||| ||  ||||||| | ||||| ||| ||||||| ||||| |||||||| || 
Sbjct: 904  agattaccaatccgaatgagcatcttagccagattgatggggatgaagatgtacactgtt 963

                                                                        
Query: 241  atttcactgtttaatgaaaatggtgaaattttggaagttcttgaagatccaaatgggttg 300
             | ||| | || ||||||||||| ||||| || |||||||| || |||||||| ||  | 
Sbjct: 964  gtatcattattcaatgaaaatggagaaatcttagaagttctagaggatccaaagggagta 1023

                                                                        
Query: 301  gtaatgaaattagtaagtgaagttagagaggttaaagggaagctttggattggaactgtt 360
            |||||||| ||||| |||||||||||||||||  |||| ||||| |||||||||||||||
Sbjct: 1024 gtaatgaagttagtgagtgaagttagagaggtacaaggaaagctgtggattggaactgtt 1083

                                               
Query: 361  gctcataatcatattgctacactcccttatcctta 395
            |||||||| |||||||||||||| |||||||||||
Sbjct: 1084 gctcataaccatattgctacacttccttatcctta 1118


>28094.m000178 strictosidine synthase, putative
          Length = 1128

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                               
Query: 254  atgaaaatggtgaaattttggaagttcttgaagat 288
            ||||||||||||| |||||||||||| ||||||||
Sbjct: 992  atgaaaatggtgacattttggaagtttttgaagat 1026