Jatropha Genome Database

JcCA0258491.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0258491.10 - phase: 0 /partial
         (657 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27704.m000147 cholinephosphate cytidylyltransferase, putative         268   4e-71

>27704.m000147 cholinephosphate cytidylyltransferase, putative
          Length = 897

 Score =  268 bits (135), Expect = 4e-71
 Identities = 414/507 (81%)
 Strand = Plus / Plus

                                                                       
Query: 86  ggcctgttcgtgtctatgctgacgggatctacgatctcttccacttcggccacgctcgct 145
           |||| ||||||||||| || ||||| |||||||||||||||||||| |||||||| || |
Sbjct: 44  ggccggttcgtgtctacgcagacggcatctacgatctcttccactttggccacgcccgtt 103

                                                                       
Query: 146 ccctcgaacaagccaaaaaatcgttcccaaacacttatttgctggttggatgttgcaacg 205
           | || || ||||| ||||||||||| || || || || ||| |||||||||| ||||| |
Sbjct: 104 ctcttgagcaagctaaaaaatcgtttcctaatacatacttgttggttggatgctgcaatg 163

                                                                       
Query: 206 atgaaatcacccacaagtacaagggaaaaactgttatgacagaatctgagcgatatgaat 265
           | ||||| || |||||||||||||| |||||||||||||  ||    ||||| ||||| |
Sbjct: 164 acgaaattacacacaagtacaagggcaaaactgttatgaacgatcaggagcgttatgagt 223

                                                                       
Query: 266 ctcttcatcattgcaagtgggttgatgaagtcattactgatgctccttgggtgatcacac 325
           ||||||  |||||||| ||||| |||||||| ||  |||||||||| |||||| ||||||
Sbjct: 224 ctcttcgccattgcaaatgggtggatgaagtgatacctgatgctccatgggtgctcacac 283

                                                                       
Query: 326 aagaatttcttgacaagcacaatattgattatgtagctcatgattcactcccctatgctg 385
           |||| || |||||||| ||    ||||| ||||| || || || || || || |||||||
Sbjct: 284 aagagttccttgacaaacatcggattgactatgtggcccacgactcccttccttatgctg 343

                                                                       
Query: 386 atgctagtggagctggaaaagatgtttatgaatttgtgaaaaaagttggaagatttaagg 445
           |||| ||||| |||||||| ||||| ||||||||||| ||     |||||| ||||||||
Sbjct: 344 atgcaagtggggctggaaacgatgtctatgaatttgtcaagtctattggaaaatttaagg 403

                                                                       
Query: 446 aaacaaaaagaactgatggaatttctacatcagacattatcatgagaatcgttaaagact 505
           |||||||| | || || || ||||| || ||||| ||||| ||||| || || |||||||
Sbjct: 404 aaacaaaacggacagaagggatttcgacctcagatattataatgaggattgtcaaagact 463

                                                                       
Query: 506 ataaccagtatgtgatgcgcaacttggatcgaggatacacgagaaaagagcttggcgtta 565
           ||||  ||||||| |||||||| |||| ||| |||||  | ||||| || || || ||||
Sbjct: 464 ataatgagtatgtaatgcgcaatttggctcgtggatattcaagaaaggaactgggtgtta 523

                                      
Query: 566 gctttgtgaaggaaaagcgcctgagag 592
           ||| ||||||||||||||| |||||||
Sbjct: 524 gctatgtgaaggaaaagcggctgagag 550