Jatropha Genome Database

JcCA0257171.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0257171.20 - phase: 0 /pseudo/partial
         (717 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004750 heat shock protein, putative                            155   4e-37

>29929.m004750 heat shock protein, putative
          Length = 762

 Score =  155 bits (78), Expect = 4e-37
 Identities = 218/264 (82%), Gaps = 3/264 (1%)
 Strand = Plus / Plus

                                                                       
Query: 227 ccaagaaaagaacggctcctgttgctccagtagggctatgggacagatttcctacagcta 286
           |||||||||||  ||||| |||||| ||||||||| | |||||||| ||||| ||||| |
Sbjct: 221 ccaagaaaagagtggctcgtgttgcaccagtagggttgtgggacaggtttccgacagcaa 280

                                                                       
Query: 287 gaacagtacagcagatgatggagacgatggagagaatgatggaagacccttttgcctata 346
           ||||||| |||||||||||||| || ||||| ||||||||||| ||||| ||| | ||  
Sbjct: 281 gaacagttcagcagatgatggaaacaatggaaagaatgatggatgacccatttacatact 340

                                                                       
Query: 347 cggctacttggccatcagagccaccatcaccagttgaacgaagtgggtatagcagaggaa 406
           |    |  |||||| |    ||| |  ||||| ||||| ||||||| ||| | |||||||
Sbjct: 341 ctagcagctggccaact---ccagctgcaccaattgaaggaagtggatatggaagaggaa 397

                                                                       
Query: 407 ggactccatgggagataaaagaaggagaaacagagtacaagatgagatttgacatgcctg 466
           |||| |||||||||||||||||||||||||  || ||||| ||||| |||||||||||||
Sbjct: 398 ggacgccatgggagataaaagaaggagaaaatgaatacaaaatgaggtttgacatgcctg 457

                                   
Query: 467 gaatgactaaagaagatgtgaagg 490
           ||||||| ||||||||||| ||||
Sbjct: 458 gaatgaccaaagaagatgttaagg 481



 Score =  131 bits (66), Expect = 6e-30
 Identities = 147/174 (84%)
 Strand = Plus / Plus

                                                                       
Query: 544 gaagaagaagaaggaggatggtctgctaagagctatgggaaatatagctgcagaattgca 603
           ||||||||||||| ||  |||||||||||||||||||| |  || ||  | |||||||| 
Sbjct: 586 gaagaagaagaagaagagtggtctgctaagagctatggaaggtacagtagtagaattgcg 645

                                                                       
Query: 604 ttacctgaaaacatacagtttgagaaaataaaagctgaggttaaagatggagttttgtat 663
           || ||||| || || || |||||||| ||||||||||||||||||||||| || ||||||
Sbjct: 646 ttgcctgagaatattcaatttgagaagataaaagctgaggttaaagatggtgtcttgtat 705

                                                                 
Query: 664 ataaccattcctaaagcttctaccactggcaagattcttgatatcaatgttcaa 717
           || ||||| |||||||||  || |  || |||||||||||||||||||||||||
Sbjct: 706 attaccatacctaaagctagtaactttgccaagattcttgatatcaatgttcaa 759