Jatropha Genome Database

JcCA0255541.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0255541.10 + phase: 0 
         (273 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29841.m002859 GTP binding protein, putative                           147   4e-35

>29841.m002859 GTP binding protein, putative
          Length = 621

 Score =  147 bits (74), Expect = 4e-35
 Identities = 178/212 (83%), Gaps = 3/212 (1%)
 Strand = Plus / Plus

                                                                       
Query: 17  ttgtagatagtgggtttatataccaagacgagaagcttttaactgtacttaaaacctctc 76
           |||| |||||||||| |||||||||||| ||||||| | | || || |||||||||||  
Sbjct: 17  ttgtggatagtgggtatatataccaagaagagaagcatcttacagtgcttaaaacctcct 76

                                                                       
Query: 77  tgttcttcgctaatgatggattcactgtctatgactgtaaaggcgagttagtcttccgag 136
           ||||||| ||||||||||| ||||||||||| || || | ||| ||||||||||||||||
Sbjct: 77  tgttctttgctaatgatggcttcactgtctacgattgcagaggtgagttagtcttccgag 136

                                                                       
Query: 137 ttgattcata---cggacctgatactcgcgatactggtgaagttgttctcatggacgccc 193
           | || || ||   ||| |||||||  || || |||| |||||||||||||||||||||  
Sbjct: 137 tcgactcttatggcggtcctgataaccgggagactgctgaagttgttctcatggacgcta 196

                                           
Query: 194 atggccgctgcttgctcaccgttagaaaaaag 225
           ||||||| || ||||||||||| |||||||||
Sbjct: 197 atggccgttgtttgctcaccgtcagaaaaaag 228