Jatropha Genome Database

JcCA0254841.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0254841.10 - phase: 2 /partial/short
         (136 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006089 isoamylase, putative                                    159   5e-39

>29908.m006089 isoamylase, putative
          Length = 2352

 Score =  159 bits (80), Expect = 5e-39
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                        
Query: 29   accaatcttaaatctccagacgactttgttcctgaaggcgtcccgggcattggaagtgtc 88
            |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |
Sbjct: 2242 accaatcttaaatctccagatgactttgttcctgaaggcgtcccaggcattggaagtgcc 2301

                                                        
Query: 89   tataatgtagctccatactcctctattcttcttgaagcaaaact 132
            |||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 2302 tataatgtagctccatactcttccattcttcttgaagctaaact 2345