Jatropha Genome Database
- JcCA0254131.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0254131.20 + phase: 0 /partial
(1272 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29851.m002400 DNA mismatch repair protein muts2, putative 739 0.0
>29851.m002400 DNA mismatch repair protein muts2, putative
Length = 2622
Score = 739 bits (373), Expect = 0.0
Identities = 844/1001 (84%)
Strand = Plus / Plus
Query: 125 ctctgcaatccgaaaccttaaaagtcctagaatggagctcgctttgcgaccggctctctt 184
|||| ||||||||| |||| |||| ||||||||||| ||| ||||||||||| ||||||
Sbjct: 134 ctctccaatccgaagccttgaaagccctagaatggaactccctttgcgaccgtctctctc 193
Query: 185 acttcacatcaacctcaatgggcaattcagtcgctcgaaatgcaagcattcccatcggga 244
|||||| ||||| ||||||||| |||||| ||| |||| ||||| |||||||| ||
Sbjct: 194 ccttcacgtcaacatcaatgggccattcagccgcccgaagcgcaagtattcccattggag 253
Query: 245 aaagcctccaggaaagccgtaagttactggaccagaccgctgcagcattggctgtcatgc 304
||||| ||||||| ||||||| |||||| ||||||||| |||| |||||||| | ||||
Sbjct: 254 aaagcatccaggagagccgtatgttactagaccagaccactgccgcattggccatgatgc 313
Query: 305 aatctgggccgctggatttttcggaaattgaagatgtaactggaattgtggattctgcgg 364
||| ||| ||||||||||||| | ||||| ||| |||| || |||||| ||||||| |
Sbjct: 314 aatatggaacgctggatttttcagcgattgaggatataacggggattgtgaattctgcag 373
Query: 365 tttctgggaatttgcttactattggtgagctctgtgctgtgagacggacgttgagagctg 424
||||||| || ||||||||| || ||||||| ||||||||||| ||||| || |||||
Sbjct: 374 tttctggtaacttgcttactgttagtgagctatgtgctgtgaggcggacactggaagctg 433
Query: 425 caagggccgtgttggagaggttaaaagatggtggagattgcttagagaggtacggtccac 484
||| || || ||||| || ||||| || |||||||||||||||||||||| ||| |
Sbjct: 434 caaaagcagtattggaaagattaaaggacggtggagattgcttagagaggtcgtatcctc 493
Query: 485 ttttggaaattctccagagatgcagcttccaaatagagttggagcagaagataggatttt 544
|| | ||||| ||| ||| || | || |||||| ||||||||||||| ||||||||||
Sbjct: 494 ttcttgaaatattccggagttgtaatttacaaatacagttggagcagaaaataggatttt 553
Query: 545 gcttagattgcaatctttcgataatccttgatagagccagtgaagaactggagatcatta 604
|| |||| |||||||||| |||||| ||||||||||| |||||||| ||||| | ||||
Sbjct: 554 gcatagactgcaatcttttgataatacttgatagagctagtgaagatttggagttgatta 613
Query: 605 ggtctgaaagaaagagaaacatggagaatctggataccttgctgaagggaatatcaactc 664
||| ||||||||||| || ||||||||||||||||| | || ||||||||||||||||||
Sbjct: 614 ggtatgaaagaaagaaaaccatggagaatctggataacctgttgaagggaatatcaactc 673
Query: 665 ggatttttcaggctgggggtgctgacagacctttggtaactaagcgccgttctaggttgt 724
|||||||||||||||| ||| ||| || ||||| |||||||||||||||||||||||||
Sbjct: 674 ggatttttcaggctggaggtattgataggccttttgtaactaagcgccgttctaggttgt 733
Query: 725 gtgtgggagttagggcaacccacagacacttgattcgtaatggtgtgattcttgatgtta 784
| |||||||||||||| ||||| ||| | ||||||| ||||||||||||| ||||| |
Sbjct: 734 gcgtgggagttagggctacccatagatatttgattccagatggtgtgattctagatgtca 793
Query: 785 gtggttctggtgcaacatacttcatggagcctgatgatgcagtcgaattgaataaccttg 844
|||||||||||||||||||||| ||||||||| ||||||||| ||||||||||| ||||
Sbjct: 794 gtggttctggtgcaacatactttgtggagcctggtgatgcagtggaattgaataatcttg 853
Query: 845 aggtcatgctctcaaactcagagagagctgaggaaatagtcattttaagcttgcttacat 904
| || ||||||||||| || ||||||||||||||||| | ||| |||| |||||||| |
Sbjct: 854 aagttatgctctcaaattctgagagagctgaggaaattgcaattctaagtttgcttactt 913
Query: 905 ctgaaatagcacaatcagagaaggaaataaagcatttattggatggaattctcaaagttg 964
|||| || ||| ||||||||| || ||||| | |||||||| |||||||| ||||||
Sbjct: 914 ctgagattgcagaatcagagagagacataaaaaaattattggacggaattctagaagttg 973
Query: 965 accttgcattttctagagctgcttatgctcaacagatgaatgcgatctgtccaattttga 1024
| ||||| ||| |||||||||||||||||| |||||| |||| | ||||||||| ||| |
Sbjct: 974 atcttgcttttgctagagctgcttatgctcgacagataaatggggtctgtccaactttta 1033
Query: 1025 cttcagagggctgtgaaggtgaactttctgggggagcacattatccattgttaatagata 1084
|||||||||||| ||||||||||| ||| | ||||| ||||| |||| | ||||||||
Sbjct: 1034 cttcagagggctatgaaggtgaaccttccagtagagcaaattatgcattatcaatagata 1093
Query: 1085 ttgaaggtataagacacccattacttattgggtcatctcaa 1125
||||||||||| ||| ||||||||| ||||||||||||||
Sbjct: 1094 ttgaaggtatacaacatccattacttcttgggtcatctcaa 1134
Score = 83.8 bits (42), Expect = 2e-15
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 1229 aatttcctgtgccaataaacattaaagtggaatgtggaacca 1270
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 aatttcctgtgccaataaacattaaagtggaatgtggaacca 1180