Jatropha Genome Database

JcCA0254131.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0254131.10 + phase: 0 /pseudo/partial
         (408 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29851.m002399 allantoinase, putative                                  172   1e-42

>29851.m002399 allantoinase, putative
          Length = 1503

 Score =  172 bits (87), Expect = 1e-42
 Identities = 171/199 (85%)
 Strand = Plus / Plus

                                                                        
Query: 210  agatatcgtcatatgggagccaagcacggtgtttgatctcaacaatgatcttcctatata 269
            |||||| ||||||||||| |||| | | | |||||| ||||   ||||||||||||||||
Sbjct: 1302 agatattgtcatatgggatccaaacgcagagtttgacctcagtgatgatcttcctatata 1361

                                                                        
Query: 270  ttttaaacatcctagtatctcagcctacatgggaaccaaactttcgggaaaagttttggc 329
              |||||||| |||||||||| ||||||| ||||||||||||||| ||||||||||| ||
Sbjct: 1362 cattaaacattctagtatctcggcctacaagggaaccaaactttcaggaaaagttttagc 1421

                                                                        
Query: 330  aacatttgttagaggaaacctagtctacaaagagggaaaacatgcttctgctgcttgcgg 389
             || ||||||||||||||||| || |||| ||||||||| |||||| || ||||||| ||
Sbjct: 1422 cacttttgttagaggaaaccttgtttacagagagggaaagcatgctcctactgcttgtgg 1481

                               
Query: 390  ttctcttatcctagcaaaa 408
            ||||| |||||| ||||||
Sbjct: 1482 ttctcctatccttgcaaaa 1500



 Score =  127 bits (64), Expect = 6e-29
 Identities = 103/116 (88%)
 Strand = Plus / Plus

                                                                        
Query: 96   tgcagtttgttcttcctgtgacatggtcatatgggcgaaaatatggagtaagtttggagc 155
            ||||||||||  |||||||||| ||| |||||||||||||||||||||||| ||||||||
Sbjct: 1160 tgcagtttgtgtttcctgtgacgtggacatatgggcgaaaatatggagtaactttggagc 1219

                                                                    
Query: 156  aattagcattgtggtggagtgaaaggcccgctaagctcgccggacaagattcaaag 211
            | ||||| |||||||||||||| || || |||||||| || |||||||| ||||||
Sbjct: 1220 agttagctttgtggtggagtgagagacctgctaagcttgctggacaagagtcaaag 1275