Jatropha Genome Database
- JcCA0251221.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0251221.10 - phase: 1 /pseudo/partial
(719 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29848.m004543 DNA binding protein, putative 553 e-157
29696.m000106 actin binding protein, putative 131 6e-30
30138.m004035 conserved hypothetical protein 60 2e-08
29827.m002589 conserved hypothetical protein 56 3e-07
>29848.m004543 DNA binding protein, putative
Length = 3801
Score = 553 bits (279), Expect = e-157
Identities = 487/555 (87%), Gaps = 1/555 (0%)
Strand = Plus / Plus
Query: 161 aggttctgctattggatttcgattggatagtctcctcaaactcacagatacacgagctcg 220
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3192 aggttctgcagttggatttcgattggatagtctcctcaaactcacagatacacgagctat 3251
Query: 221 gaataacaagatgactcttatgcattatctctgtaaggttctgtctgaaaagcttccaga 280
||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct: 3252 aaataacaagatgactctcatgcattatctctgtaaggtacttgctgaaaagcttccaga 3311
Query: 281 actgctcgattttccaaaggacctcatgaatttggaagctgcaaccaaaatacaattgaa 340
|||||| ||||||| ||||||||||||| |||||| ||||| || ||||||||||||||
Sbjct: 3312 actgctggattttcagaaggacctcatgagtttggaggctgcgacaaaaatacaattgaa 3371
Query: 341 atatttggcagaggaaatgcaagccattagtaaaggactggagaaagttgtgcaggaatt 400
|||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||||||
Sbjct: 3372 atatttggcagaagaaatgcaagccattagcaaagggctggagaaagttttgcaggaatt 3431
Query: 401 gactgcttccgagaatgatggtcaagtgtcggaaagtttctgtaagatcctaaaggaatt 460
||||| || ||||||||||| || ||||| ||| || || |||| |||||||| |||
Sbjct: 3432 aactgcctcagagaatgatggccatgtgtctgaatacttttgcaagagcctaaaggtatt 3491
Query: 461 cctcagttctgctgaaagtgaagtgagatctttggctttactttattctacagtgggtag 520
||| ||||| || ||||||||||| || || ||||||| || ||||| || ||||| ||
Sbjct: 3492 ccttagttccgcagaaagtgaagtaaggtcattggcttccctctattccactgtgggcag 3551
Query: 521 aaatgcagatgcattggctctttattttggggaagaccctgctcgatgcccatttgagca 580
|||||||||||||||||| ||||||||||| ||||| ||||| || ||||||||||||||
Sbjct: 3552 aaatgcagatgcattggccctttattttggagaagatcctgcacgttgcccatttgagca 3611
Query: 581 agtagtgtctactctgctaaatttcgtgaggatgttttcccgagcacacgaggaaaactg 640
||| |||||||||||||||||||| |||| ||||||| ||||||||| || ||||| ||
Sbjct: 3612 agttgtgtctactctgctaaattttgtgaagatgtttatccgagcacatgatgaaaattg 3671
Query: 641 caagcagcttgagtttgaaaggaaaa-agcagagagggatgcagaaaatgaaaagttgag 699
|||||||||||| ||| |||||||| ||| |||| ||| |||||||||||||||||||
Sbjct: 3672 caagcagcttgaacttgtaaggaaaagagcggagaaggaagcagaaaatgaaaagttgaa 3731
Query: 700 gatgggtgcctccaa 714
||||| ||| |||||
Sbjct: 3732 gatggatgcttccaa 3746
>29696.m000106 actin binding protein, putative
Length = 3576
Score = 131 bits (66), Expect = 6e-30
Identities = 192/234 (82%)
Strand = Plus / Plus
Query: 165 tctgctattggatttcgattggatagtctcctcaaactcacagatacacgagctcggaat 224
||||||||||||||| | ||||||||||| || || | || || ||||| || ||||
Sbjct: 2983 tctgctattggatttaggttggatagtcttcttaagttaactgacacacgggcaaggaac 3042
Query: 225 aacaagatgactcttatgcattatctctgtaaggttctgtctgaaaagcttccagaactg 284
|||||||| ||||| ||||||||||| |||||||| ||| |||| ||||| ||||||||
Sbjct: 3043 aacaagataactctcatgcattatctttgtaaggtgctggctgacaagctaccagaactt 3102
Query: 285 ctcgattttccaaaggacctcatgaatttggaagctgcaaccaaaatacaattgaaatat 344
|| |||||| |||| ||||| | ||||||| ||||| | || |||||||| |||| |
Sbjct: 3103 ctagatttttcaaaagaccttgccagtttggaatctgcatcaaagatacaattaaaattt 3162
Query: 345 ttggcagaggaaatgcaagccattagtaaaggactggagaaagttgtgcaggaa 398
||||||||||||||||||||||| || || ||| |||| ||| |||| ||||||
Sbjct: 3163 ttggcagaggaaatgcaagccataagcaagggattggaaaaaattgtacaggaa 3216
>30138.m004035 conserved hypothetical protein
Length = 4653
Score = 60.0 bits (30), Expect = 2e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 313 tggaagctgcaaccaaaatacaattgaaatatttggcagaggaaatgcaagccattagta 372
|||||||||||||||| |||||||| || | ||| ||||| ||||||||||| || | ||
Sbjct: 4229 tggaagctgcaaccaagatacaattaaagtctttagcagaagaaatgcaagctataatta 4288
Query: 373 aaggactgga 382
| ||||||||
Sbjct: 4289 agggactgga 4298
>29827.m002589 conserved hypothetical protein
Length = 375
Score = 56.0 bits (28), Expect = 3e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 512 agtgggtagaaatgcagatgcattggctctttattttggggaagaccctgctcgatgccc 571
|||||| |||||||||||| ||||| ||| |||||||| || || || ||||| |||||
Sbjct: 105 agtgggaagaaatgcagattcattgtctcaatattttggagaggatccagctcgttgccc 164
Query: 572 atttgagcaagt 583
|||||||||||
Sbjct: 165 ctttgagcaagt 176