Jatropha Genome Database

JcCA0250521.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0250521.10 + phase: 0 
         (360 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004703 plant mitotic spindle assembly checkpoint protein ...   476   e-134

>29929.m004703 plant mitotic spindle assembly checkpoint protein
           mad2, putative
          Length = 624

 Score =  476 bits (240), Expect = e-134
 Identities = 330/360 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcaaggtcaccaacgaggtcctagagagatggaattttagtattgaaactgatagt 60
           |||||||||| |||||| |||||||||||||||||||| || || ||||| |||||||||
Sbjct: 265 atgagcaaggccaccaatgaggtcctagagagatggaacttcagcattgagactgatagt 324

                                                                       
Query: 61  gaggtggtcgaaaaaggggtatcaagggaaaagagtgataaagaaataatgagggagata 120
           ||||| ||| | || ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 325 gaggtcgtccagaagggggtgtcgagggaaaagagtgacaaagaaataatgagggagata 384

                                                                       
Query: 121 caagcaatcatgcgtcagattgcttcgagtattacttacttgccatgccttgatgaagct 180
           || ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||
Sbjct: 385 caggcaatcatgcgccagatagcttctagtattacttacttgccatgccttgacgaagct 444

                                                                       
Query: 181 tgtgtatttgatgtgctagcctacaccgataaagatgttgcagtcccttttacctggatt 240
           ||||| ||||||||| |||| || || ||||||||||||||||||||||| || ||||||
Sbjct: 445 tgtgtttttgatgtgttagcatatacggataaagatgttgcagtccctttcacttggatt 504

                                                                       
Query: 241 gaaagtgatccaaaattgattgccaatccacaaatggtgaaattgcattcttttgatacc 300
           || |||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 505 gagagtgatccgaaattgatagccaatccacagatggtgaaattgcattcttttgatacc 564

                                                                       
Query: 301 aagatacacaaggttgacactctggtttcatacaagaatgacgaatgggatgagcagtag 360
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 565 aagatacacaaggttgacactctggtttcatacaagaatgatgaatgggatgagcagtag 624