Jatropha Genome Database

JcCA0246001.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0246001.10 + phase: 1 /pseudo/partial
         (305 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29610.m000406 adenylosuccinate lyase, putative                        121   3e-27

>29610.m000406 adenylosuccinate lyase, putative
          Length = 1422

 Score =  121 bits (61), Expect = 3e-27
 Identities = 118/137 (86%)
 Strand = Plus / Plus

                                                                       
Query: 147 atggctgcgcgggattttgagctatcgagtttaacggcgttgtctcctttggatgggcgg 206
           |||||||| || ||||||||| |||||| ||||||||| || || ||||||||||| |||
Sbjct: 1   atggctgcacgtgattttgagttatcgaatttaacggcattatcgcctttggatggacgg 60

                                                                       
Query: 207 tattggggtaaagtgaaagacttgtctcctcatatgagtgaatatgggctaatcttttat 266
           |||||| ||||||| ||||| || || ||| |||||||||||| |||||||||||  |||
Sbjct: 61  tattggagtaaagttaaagatttatcgccttatatgagtgaatttgggctaatctactat 120

                            
Query: 267 cgggttctagttgaggt 283
           || ||||| ||||||||
Sbjct: 121 cgagttcttgttgaggt 137