Jatropha Genome Database
- JcCA0242371.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0242371.10 - phase: 0 /pseudo/partial
(441 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m014385 rac gtpase, putative 494 e-139
29602.m000209 rac gtpase, putative 319 8e-87
28962.m000460 rac gtpase, putative 216 8e-56
29646.m001113 rac gtpase, putative 143 1e-33
29912.m005491 rac gtpase, putative 143 1e-33
29900.m001556 rac gtpase, putative 123 9e-28
29709.m001184 rac gtpase, putative 98 5e-20
30147.m013989 rac gtpase, putative 90 1e-17
>30170.m014385 rac gtpase, putative
Length = 594
Score = 494 bits (249), Expect = e-139
Identities = 333/361 (92%)
Strand = Plus / Plus
Query: 1 atgagtgcctctaggttcattaagtgcgtcaccgtcggcgatggtgccgtcggaaagacc 60
||||| |||||| |||||||||||||||||||||||||||| || || ||||| |||||
Sbjct: 1 atgagcgcctctcggttcattaagtgcgtcaccgtcggcgacggcgctgtcggcaagact 60
Query: 61 tgcatgcttatttcctacaccagcaacaccttccctacggattatgtaccaactgttttt 120
|||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 61 tgcatgcttatttcttacactagcaacactttccctacggactatgtaccaactgttttt 120
Query: 121 gacaatttcagtgcaaatgtggttgtggatgggagcactgttaatctaggattatgggat 180
||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||
Sbjct: 121 gacaatttcagtgcaaatgtggttgtggatgggagcactgtcaatttgggattatgggat 180
Query: 181 actgctggtcaggaggattacaatcgattaagacctttaagctatcgaggtgcagatgtc 240
|||||||| ||||||||||||||| ||||||||||||| ||||| ||||| ||||| |||
Sbjct: 181 actgctggccaggaggattacaatagattaagacctttgagctaccgaggcgcagacgtc 240
Query: 241 tttattctggcattctctttaatcagcaaggccagctatgaaaatgttgccaaaaagtgg 300
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttatccttgcattctctttaatcagcaaggccagctatgaaaatgttgccaaaaagtgg 300
Query: 301 attcctgaactgaagcattatgcacctggagttccggttattcttgttggaacgaaactt 360
|| |||||||||| |||||| |||||||||||||| |||||||||||||||| ||||||
Sbjct: 301 atacctgaactgaggcattacgcacctggagttccaattattcttgttggaacaaaactt 360
Query: 361 g 361
|
Sbjct: 361 g 361
>29602.m000209 rac gtpase, putative
Length = 597
Score = 319 bits (161), Expect = 8e-87
Identities = 305/353 (86%)
Strand = Plus / Plus
Query: 1 atgagtgcctctaggttcattaagtgcgtcaccgtcggcgatggtgccgtcggaaagacc 60
|||||||| || |||||||| ||||| || || || || || ||||| || || |||||
Sbjct: 1 atgagtgcttcaaggttcataaagtgtgttactgttggtgacggtgctgttggcaagact 60
Query: 61 tgcatgcttatttcctacaccagcaacaccttccctacggattatgtaccaactgttttt 120
|| |||||||| ||||||||||||||||| ||||| || |||||||| || ||||| |||
Sbjct: 61 tgtatgcttatctcctacaccagcaacactttccccactgattatgttcctactgtattt 120
Query: 121 gacaatttcagtgcaaatgtggttgtggatgggagcactgttaatctaggattatgggat 180
|||||||||||||| ||||| ||||||||||||||||| || |||||||| ||||||||
Sbjct: 121 gacaatttcagtgccaatgttgttgtggatgggagcacagtcaatctagggctatgggat 180
Query: 181 actgctggtcaggaggattacaatcgattaagacctttaagctatcgaggtgcagatgtc 240
||||| || ||||| ||||||||| ||||||||||| |||||||||| || ||||||||
Sbjct: 181 actgcaggccaggaagattacaatagattaagacctctaagctatcgcggggcagatgtt 240
Query: 241 tttattctggcattctctttaatcagcaaggccagctatgaaaatgttgccaaaaagtgg 300
||| | || ||||||||| | || |||||||||||||||||||||||||| ||||| |||
Sbjct: 241 tttctgcttgcattctctctcattagcaaggccagctatgaaaatgttgcaaaaaaatgg 300
Query: 301 attcctgaactgaagcattatgcacctggagttccggttattcttgttggaac 353
||||||||| ||| |||||||||||||||||| || ||||||||||||||||
Sbjct: 301 attcctgaattgaggcattatgcacctggagtaccaattattcttgttggaac 353
>28962.m000460 rac gtpase, putative
Length = 594
Score = 216 bits (109), Expect = 8e-56
Identities = 265/317 (83%)
Strand = Plus / Plus
Query: 13 aggttcattaagtgcgtcaccgtcggcgatggtgccgtcggaaagacctgcatgcttatt 72
||||| || ||||||||||| || || ||||||||||| || || || ||| | | |||
Sbjct: 13 aggtttatcaagtgcgtcacggttggtgatggtgccgttggtaaaacttgccttttgatt 72
Query: 73 tcctacaccagcaacaccttccctacggattatgtaccaactgtttttgacaatttcagt 132
|| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 73 tcttacaccagcaacaccttccctacggattatgtgccaactgttttcgacaatttcagt 132
Query: 133 gcaaatgtggttgtggatgggagcactgttaatctaggattatgggatactgctggtcag 192
||||||||||| || | || ||||||||| || || || |||||||| ||||| ||
Sbjct: 133 gcaaatgtggtcgtcaacggtgccactgttaacctggggttgtgggatacagctgggcaa 192
Query: 193 gaggattacaatcgattaagacctttaagctatcgaggtgcagatgtctttattctggca 252
|||||||||||| |||||||||||||||| || || || || ||||| || || ||||||
Sbjct: 193 gaggattacaatagattaagacctttaagttaccgtggagccgatgttttcatactggca 252
Query: 253 ttctctttaatcagcaaggccagctatgaaaatgttgccaaaaagtggattcctgaactg 312
||||| | || ||||||||||| || ||||||||| | || ||||||||||| || ||
Sbjct: 253 ttctccctcattagcaaggccagttacgaaaatgtttctaagaagtggattccggagttg 312
Query: 313 aagcattatgcacctgg 329
|| ||||||||||||||
Sbjct: 313 aaacattatgcacctgg 329
>29646.m001113 rac gtpase, putative
Length = 594
Score = 143 bits (72), Expect = 1e-33
Identities = 255/316 (80%)
Strand = Plus / Plus
Query: 11 ctaggttcattaagtgcgtcaccgtcggcgatggtgccgtcggaaagacctgcatgctta 70
||||||| || ||||| || || || || ||||| || || |||||||| |||||||| |
Sbjct: 11 ctaggtttatcaagtgtgtaactgttggtgatggagcggttggaaagacatgcatgctca 70
Query: 71 tttcctacaccagcaacaccttccctacggattatgtaccaactgtttttgacaatttca 130
|||| ||||| ||||| |||||||| || ||||| || || || || |||||||| ||||
Sbjct: 71 tttcttacacgagcaataccttccccactgattacgttcctacggtgtttgacaacttca 130
Query: 131 gtgcaaatgtggttgtggatgggagcactgttaatctaggattatgggatactgctggtc 190
|||| ||||| ||||| ||||| ||||| || ||||| || || ||||||||||| || |
Sbjct: 131 gtgctaatgtagttgttgatggcagcacagtcaatcttggcttgtgggatactgcaggac 190
Query: 191 aggaggattacaatcgattaagacctttaagctatcgaggtgcagatgtctttattctgg 250
|||| ||||| || |||| || ||||| || ||| ||||||||||||| ||| || |||
Sbjct: 191 aggaagattataacagattgaggcctttgagttatagaggtgcagatgtgtttcttttgg 250
Query: 251 cattctctttaatcagcaaggccagctatgaaaatgttgccaaaaagtggattcctgaac 310
| || || | |||||||| || |||||||||||| || |||| |||||| | ||||| |
Sbjct: 251 ccttttcccttatcagcaaagctagctatgaaaatatttccaagaagtgggtacctgagc 310
Query: 311 tgaagcattatgcacc 326
| | ||||||||||||
Sbjct: 311 ttaggcattatgcacc 326
>29912.m005491 rac gtpase, putative
Length = 630
Score = 143 bits (72), Expect = 1e-33
Identities = 168/200 (84%)
Strand = Plus / Plus
Query: 1 atgagtgcctctaggttcattaagtgcgtcaccgtcggcgatggtgccgtcggaaagacc 60
|||||||| || | ||||||||| || || || || || |||||||| || || |||||
Sbjct: 1 atgagtgcttccaagttcattaaatgtgttacagttggagatggtgctgttggcaagact 60
Query: 61 tgcatgcttatttcctacaccagcaacaccttccctacggattatgtaccaactgttttt 120
|| ||||| |||| ||||||||||||| |||||||| |||||| |||| || || |||
Sbjct: 61 tgtatgctcatttgttacaccagcaacaagttccctactgattatatacccacagtattt 120
Query: 121 gacaatttcagtgcaaatgtggttgtggatgggagcactgttaatctaggattatgggat 180
|| ||||||||||| ||||||| ||||||||||| || ||| ||||| ||||||||||||
Sbjct: 121 gataatttcagtgctaatgtggctgtggatgggaacattgtcaatctgggattatgggat 180
Query: 181 actgctggtcaggaggatta 200
||||| ||||||||||||||
Sbjct: 181 actgcaggtcaggaggatta 200
>29900.m001556 rac gtpase, putative
Length = 594
Score = 123 bits (62), Expect = 9e-28
Identities = 152/182 (83%)
Strand = Plus / Plus
Query: 19 attaagtgcgtcaccgtcggcgatggtgccgtcggaaagacctgcatgcttatttcctac 78
|||||||||||||| || || ||||| || || |||||||| |||||||| ||||| |||
Sbjct: 19 attaagtgcgtcactgtaggggatggggctgtaggaaagacttgcatgctcatttcttac 78
Query: 79 accagcaacaccttccctacggattatgtaccaactgtttttgacaatttcagtgcaaat 138
|| ||||| || || |||||||||||||| || || || ||||||||||| ||||| |||
Sbjct: 79 actagcaatacttttcctacggattatgttcccacagtatttgacaattttagtgctaat 138
Query: 139 gtggttgtggatgggagcactgttaatctaggattatgggatactgctggtcaggaggat 198
||||| || ||||| || || || ||||| ||||||||||| || ||||| ||||| |||
Sbjct: 139 gtggtggtagatggtagtacagtgaatcttggattatgggacacggctgggcaggaagat 198
Query: 199 ta 200
||
Sbjct: 199 ta 200
>29709.m001184 rac gtpase, putative
Length = 609
Score = 97.6 bits (49), Expect = 5e-20
Identities = 115/137 (83%)
Strand = Plus / Plus
Query: 67 cttatttcctacaccagcaacaccttccctacggattatgtaccaactgtttttgacaat 126
||||| || ||||| ||||||||||||||||| |||||||| || ||||||||||| ||
Sbjct: 85 cttatctcttacactagcaacaccttccctacagattatgttcctactgtttttgataac 144
Query: 127 ttcagtgcaaatgtggttgtggatgggagcactgttaatctaggattatgggatactgct 186
|||||||| ||||| | || ||||| | ||||| ||||| || | ||||| ||||||
Sbjct: 145 ttcagtgccaatgtcatggttgatggcaagactgtgaatctgggtctctgggacactgct 204
Query: 187 ggtcaggaggattacaa 203
|||||||||||||||||
Sbjct: 205 ggtcaggaggattacaa 221
>30147.m013989 rac gtpase, putative
Length = 636
Score = 89.7 bits (45), Expect = 1e-17
Identities = 114/137 (83%)
Strand = Plus / Plus
Query: 4 agtgcctctaggttcattaagtgcgtcaccgtcggcgatggtgccgtcggaaagacctgc 63
||||| || |||||||| ||||| || || || || |||||||| || || || ||||||
Sbjct: 10 agtgcttccaggttcatcaagtgtgtgacagtaggagatggtgctgtaggcaaaacctgc 69
Query: 64 atgcttatttcctacaccagcaacaccttccctacggattatgtaccaactgtttttgac 123
|||||||||| |||||| || |||| || ||||| |||||| |||| ||||| ||||||
Sbjct: 70 atgcttatttgctacactagtaacaagtttcctactgattatatacccactgtgtttgac 129
Query: 124 aatttcagtgcaaatgt 140
|| ||||||||||||||
Sbjct: 130 aacttcagtgcaaatgt 146