Jatropha Genome Database

JcCA0241461.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0241461.10 + phase: 0 /partial
         (827 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005417 aspartyl-tRNA synthetase, putative                      234   7e-61
29912.m005418 asparagine--tRNA ligase, putative                       232   3e-60

>29912.m005417 aspartyl-tRNA synthetase, putative
          Length = 1095

 Score =  234 bits (118), Expect = 7e-61
 Identities = 214/246 (86%)
 Strand = Plus / Plus

                                                                       
Query: 574 atgtttcaagttaccaccttgataagtgaaattgaaaagatagagaaggagctgattcag 633
           |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||| 
Sbjct: 1   atgtttcaagttactaccttgattagtgaaattgaaaagatagagaaggacctgattcaa 60

                                                                       
Query: 634 aatcctcctccatcagaagctgaaattgaagcagctaagcttgttgttaaggagagagga 693
           |||||||||||||||||  |||| || |||||||||||||||||||| || |||| ||||
Sbjct: 61  aatcctcctccatcagagactgacatagaagcagctaagcttgttgtcaatgagaaagga 120

                                                                       
Query: 694 gaggctgtggctcaactgaaatctgctaaagcaagtaaggaggagatagctgcttcagtg 753
           ||||||||    || || |||||||||||||||||||||||  | |||  ||||||||||
Sbjct: 121 gaggctgtcagccagcttaaatctgctaaagcaagtaaggataatataagtgcttcagtg 180

                                                                       
Query: 754 gctgaactgacaacagcaaaggagaatgtctcaaggctggtggaaagatctaaacttaaa 813
           |||||||| | || ||||||||||||| ||| || ||||| ||||||| ||||| | |||
Sbjct: 181 gctgaactaaaaaaagcaaaggagaatctcttaaagctggaggaaagagctaaattaaaa 240

                 
Query: 814 cctggc 819
           ||||||
Sbjct: 241 cctggc 246


>29912.m005418 asparagine--tRNA ligase, putative
          Length = 468

 Score =  232 bits (117), Expect = 3e-60
 Identities = 270/321 (84%)
 Strand = Plus / Plus

                                                                       
Query: 127 tgggtgaagaccggaagagagcagggcaaaggatccttcgcctttttggagttgaacgac 186
           ||||| || ||||| |||||||| || ||||| || || || ||| ||||| | ||||||
Sbjct: 127 tgggtaaaaaccgggagagagcaaggtaaagggtcgtttgcgtttctggagctaaacgac 186

                                                                       
Query: 187 ggctcgtgttctgccaatctccaggttattgtggagaaggaagtggcggatctgagcccg 246
           ||  ||||  | || || || ||||| |||||||| |||||||| |||||||||||||| 
Sbjct: 187 gggacgtgcccggcgaacctacaggtcattgtggaaaaggaagtagcggatctgagcccc 246

                                                                       
Query: 247 ctggttcacactggcgcatgcgtctccgttgagggcgtcctcaaagagccacctgaagga 306
            |||| || ||||| || ||||| || ||||| || || || ||||||||||||||||||
Sbjct: 247 ttggtgcatactggggcgtgcgtgtctgttgaaggagttcttaaagagccacctgaagga 306

                                                                       
Query: 307 accaaacagaagattgagctccgagttgaaaaagtgctccatgttggacccgttgacccg 366
           || ||||||||||||||||| || |||||||||||| ||||||||||||| |||||||||
Sbjct: 307 actaaacagaagattgagctgcgggttgaaaaagtgatccatgttggacctgttgacccg 366

                                                                       
Query: 367 gctaagtacccgattcctaagacgaagcttacgcttgagttcttgagggatcgtatccat 426
           |||||||| ||||||||||| || |||||||| ||||||||||| || || | |||||||
Sbjct: 367 gctaagtatccgattcctaaaaccaagcttactcttgagttcttaagagaccatatccat 426

                                
Query: 427 tttcgacccagaacaaacacg 447
            || |||||||||| ||||||
Sbjct: 427 cttagacccagaactaacacg 447