Jatropha Genome Database

JcCA0240721.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0240721.10 - phase: 0 
         (642 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29092.m000462 Dehydration-responsive element-binding protein 1B,...   283   6e-76
30174.m008790 Transcriptional factor TINY, putative                    52   4e-06

>29092.m000462 Dehydration-responsive element-binding protein 1B,
           putative
          Length = 561

 Score =  283 bits (143), Expect = 6e-76
 Identities = 251/287 (87%)
 Strand = Plus / Plus

                                                                       
Query: 94  gtttatagaggcgttaggcgtaggagtagtggaaaatgggtgtctgaaattagagagcct 153
           |||||| |||| |||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 61  gtttatcgaggagttaggcgaaggagtagtggaaaatgggtatctgaaattagagagcct 120

                                                                       
Query: 154 agaaagcctaataggatttggttaggcacatttcctacgccggaaatggctgctatagct 213
           | ||||||||||||||||||||||||||||||||| || || |||||||||||| | |||
Sbjct: 121 aaaaagcctaataggatttggttaggcacatttccaactcctgaaatggctgctgttgct 180

                                                                       
Query: 214 tatgatgtagctgctttggcgcttaaaggtagagatactgagcttaatttccctaactca 273
           |||||||| || ||||| || || |||||||||||| |||| |||||||| || ||||||
Sbjct: 181 tatgatgttgcagctttagcactcaaaggtagagatgctgaacttaattttccaaactca 240

                                                                       
Query: 274 gcaccatctctgcctgtaccagcatctacatccccgcgtgatattcaggcggctgctgcc 333
           ||  | ||||| ||||| ||||||||| | || |||||||||||||||||||||||||| 
Sbjct: 241 gctgcttctcttcctgttccagcatctgcttcgccgcgtgatattcaggcggctgctgct 300

                                                          
Query: 334 tctgcagcttctgctctaggggctgcaagagacgctttgggaattgg 380
           ||||| ||| ||||| |||| |||||||| || || || ||||||||
Sbjct: 301 tctgctgctgctgctataggcgctgcaagggatgcgttaggaattgg 347



 Score =  127 bits (64), Expect = 9e-29
 Identities = 82/88 (93%)
 Strand = Plus / Plus

                                                                       
Query: 473 aatttgttgatgaagatttgatatttgatatgcctaatcttcttgtcaatatggctgaag 532
           ||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||
Sbjct: 407 aatttgttgatgaagatttgatatttgatatgcctaatctcttagttaatatggctgaag 466

                                       
Query: 533 ggatgcttcttagtcctcctcgcttgga 560
           | ||||||||||| ||||||||||||||
Sbjct: 467 gaatgcttcttagccctcctcgcttgga 494


>30174.m008790 Transcriptional factor TINY, putative
          Length = 831

 Score = 52.0 bits (26), Expect = 4e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 196 gaaatggctgctatagcttatgatgtagctgctttggc 233
           |||||||| |||| |||| |||||||||||||||||||
Sbjct: 376 gaaatggcagctagagctcatgatgtagctgctttggc 413