Jatropha Genome Database
- JcCA0240711.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0240711.10 - phase: 0 /partial
(378 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m008801 malate dehydrogenase, putative 472 e-133
29200.m000165 malate dehydrogenase, putative 236 8e-62
29200.m000164 malate dehydrogenase, putative 54 6e-07
>30174.m008801 malate dehydrogenase, putative
Length = 999
Score = 472 bits (238), Expect = e-133
Identities = 331/362 (91%)
Strand = Plus / Plus
Query: 17 ttagagttttggtcactggcgctgctgggcaaataggctatgctattgttccaatgattg 76
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 17 ttagagttttggtcactggcgctgctgggcaaataggctatgctatcgttccaatgattg 76
Query: 77 ctagaggagtcatgctaggccctgatcaacctgtaattctgcacatgcttgatattgaac 136
| || |||||||||||||| |||||||||||||||||||| ||| |||||||||| ||||
Sbjct: 77 caaggggagtcatgctaggtcctgatcaacctgtaattctccacttgcttgatatagaac 136
Query: 137 ctgcagctgaggccttgaacggggtgaaaatggaaatgatagatgcagcctttcctctgc 196
||||| ||||||||||||| ||||| ||||||||| | |||||||| |||||||||||||
Sbjct: 137 ctgcatctgaggccttgaaaggggtaaaaatggaacttatagatgctgcctttcctctgc 196
Query: 197 taaaaggagttattgctactactgatgttgttgaagcatgcatgggagtcaatgttgcgg 256
||||||||||||||||||| ||||||| ||||||||| || ||||| || ||| ||||||
Sbjct: 197 taaaaggagttattgctaccactgatgctgttgaagcttgtatgggcgtgaatattgcgg 256
Query: 257 ttatggttggtgggtttccacgaaaagaaggtatggagagaaaggatgtgatgtctaaaa 316
||||||||||||| ||||| ||||| ||||||||||| || || ||||||||||| ||||
Sbjct: 257 ttatggttggtggatttcctcgaaaggaaggtatggaaaggaaagatgtgatgtccaaaa 316
Query: 317 atgtatctatttacaaggctcaggcttcagcattggagaagcatgctgctgcagattgca 376
|||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 317 atgtgtcgatttacaaggctcaggcttcagccctggagaagcatgctgctgcagattgca 376
Query: 377 ag 378
||
Sbjct: 377 ag 378
>29200.m000165 malate dehydrogenase, putative
Length = 999
Score = 236 bits (119), Expect = 8e-62
Identities = 293/351 (83%)
Strand = Plus / Plus
Query: 28 gtcactggcgctgctgggcaaataggctatgctattgttccaatgattgctagaggagtc 87
|||||||| ||||| || ||||| || ||||| |||| || |||||||| || |||||
Sbjct: 28 gtcactggtgctgcaggacaaattggatatgcacttgtgcccatgattgccaggggagta 87
Query: 88 atgctaggccctgatcaacctgtaattctgcacatgcttgatattgaacctgcagctgag 147
||||| || ||||| |||||||| ||||| ||||||||||||||| ||||||||| |||
Sbjct: 88 atgctcggtcctgaccaacctgtgattctccacatgcttgatattccacctgcagccgag 147
Query: 148 gccttgaacggggtgaaaatggaaatgatagatgcagcctttcctctgctaaaaggagtt 207
|| ||||| || ||||| |||||| || | ||||| || ||||| || || ||||| |||
Sbjct: 148 gcattgaatggtgtgaagatggaattggtggatgctgcttttccacttcttaaaggtgtt 207
Query: 208 attgctactactgatgttgttgaagcatgcatgggagtcaatgttgcggttatggttggt 267
||||||| |||||||||||||| ||||||| ||||| |||||||| || |||||||||
Sbjct: 208 gttgctacgactgatgttgttgaggcatgcactggagtaaatgttgcagtcatggttggt 267
Query: 268 gggtttccacgaaaagaaggtatggagagaaaggatgtgatgtctaaaaatgtatctatt 327
|| || || | |||||||| ||||||||||| |||||||||||||||||||| || ||
Sbjct: 268 ggattcccgaggaaagaaggaatggagagaaaagatgtgatgtctaaaaatgtgtcaata 327
Query: 328 tacaaggctcaggcttcagcattggagaagcatgctgctgcagattgcaag 378
|||||| |||||||||| ||| | |||||||| ||||||||| | ||||||
Sbjct: 328 tacaagtctcaggcttctgcactagagaagcacgctgctgcaaactgcaag 378
>29200.m000164 malate dehydrogenase, putative
Length = 801
Score = 54.0 bits (27), Expect = 6e-07
Identities = 165/211 (78%)
Strand = Plus / Plus
Query: 28 gtcactggcgctgctgggcaaataggctatgctattgttccaatgattgctagaggagtc 87
|||||||| ||||| || ||||| || ||||| |||| || |||||||| || ||| |
Sbjct: 28 gtcactggagctgcaggacaaatcggatatgcacttgtccccatgattgccaggggaatg 87
Query: 88 atgctaggccctgatcaacctgtaattctgcacatgcttgatattgaacctgcagctgag 147
||||| || ||||| ||||| || || || |||||||| ||||| |||||||| |||
Sbjct: 88 atgcttggacctgaccaaccagtgatccttcacatgctcgatatcccacctgcagtagag 147
Query: 148 gccttgaacggggtgaaaatggaaatgatagatgcagcctttcctctgctaaaaggagtt 207
|| ||||| || ||||| ||||| || | ||||| || ||||| || || ||||| ||
Sbjct: 148 gcattgaatggcgtgaagatggagttggtggatgctgcttttccacttcttaaaggcatt 207
Query: 208 attgctactactgatgttgttgaagcatgca 238
| ||||| ||||||||||| || |||||||
Sbjct: 208 gtcgctacaactgatgttgtcgacgcatgca 238