Jatropha Genome Database
- JcCA0240561.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0240561.10 - phase: 1 /partial
(1251 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30131.m007071 bifunctional dihydrofolate reductase-thymidylate s... 1082 0.0
30170.m014082 bifunctional dihydrofolate reductase-thymidylate s... 188 5e-47
>30131.m007071 bifunctional dihydrofolate reductase-thymidylate
synthase, putative
Length = 1587
Score = 1082 bits (546), Expect = 0.0
Identities = 944/1077 (87%), Gaps = 6/1077 (0%)
Strand = Plus / Plus
Query: 173 tgatccaagaagaacgtaccaagttgttgtggctgctactagggacatgggtattggaaa 232
||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct: 57 tgatccaagaagaacttaccaagttgttgtggctgcaactagggatatgggtattgggaa 116
Query: 233 agaagggaagttgccatggagattgccttctgatctcaaattcttcaaggatgttactct 292
|| ||||| | ||||||||||| ||||||||||||||||| || |||||||||||| |
Sbjct: 117 ggatgggaaacttccatggagattaccttctgatctcaaattttttaaggatgttacttt 176
Query: 293 gactacttctgattctggaagaaagaatgcagtaataatgggtagaaaaacatgggaaag 352
||||||| |||||||||| | ||||||||| || ||||||||||||||||||||||||||
Sbjct: 177 gactactactgattctgggaaaaagaatgctgttataatgggtagaaaaacatgggaaag 236
Query: 353 tattccacttgagcatcgtcctcttcctggtcgccttaatgttgttctgactcgatctgg 412
|||||| || |||||||| |||||||||||||| || ||||||||| |||||||||| ||
Sbjct: 237 tattcctctagagcatcgacctcttcctggtcgtctgaatgttgttttgactcgatcagg 296
Query: 413 gagttttgatattgctactgctgagaatgtagtgatatgtggaagcttaacttctgctct 472
||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| |
Sbjct: 297 cagttttgatattgctactgctgagaatgttgtgatgtgtggaagctttgcttctgcttt 356
Query: 473 ggaattattggctgcatctccttactgcctatcaattgagaaagtctttatcattggagg 532
||||||||||||||| ||||| || || || ||||| |||||||| | | |||| |||||
Sbjct: 357 ggaattattggctgcttctccatattgtctctcaatcgagaaagtatatgtcataggagg 416
Query: 533 tggccaaatattaagggaatctctcaacgcacctgggtgtgatgctatccacatcacaga 592
|||||||| ||||||||| |||| || |||||||| ||||||||| ||||||| |||||
Sbjct: 417 aggccaaattttaagggaagctcttaatgcacctggatgtgatgctgtccacattacaga 476
Query: 593 aatcgagacaagcattgattgtgatacttttatccctaaaattgattcttctgtctttca 652
||| ||||||||| |||||||||||||||| || ||| ||||||||||||| | |||||
Sbjct: 477 aattgagacaagctttgattgtgatactttcattcctgcaattgattcttctatatttca 536
Query: 653 accttggtattcatcctttcccattgtagaaaacaatgtaagatattgctttgcaactta 712
|||||||||| |||||||||||| |||||||| || || |||||| |||||||||||
Sbjct: 537 tccttggtatttatcctttcccatggtagaaaataacatacgatattcatttgcaactta 596
Query: 713 tgtacgagtgagggtttctgcggttgagtcccatggtcaagataatggtctgagctctga 772
||| ||||| ||| ||||| ||||| ||| ||||||| |||| |||||||||||||||
Sbjct: 597 tgttcgagttaggagctctgcagttgaatccaatggtcacgatagtggtctgagctctga 656
Query: 773 taatagtt------acattaagtttgaggtaaagaagttctctttccttccaaagatggt 826
| |||| | | |||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct: 657 aagcagttcagaaaatagtaagttcgatgtaaaaaagttttctttccttcctaagatggt 716
Query: 827 ttttgagagacatgaggagttcttgtacctgagacttgtccaagacattatctcagatgg 886
|||||| ||||| |||||||||||||| ||||||||||| ||||| || ||||| |||||
Sbjct: 717 ttttgacagacacgaggagttcttgtatctgagacttgttcaagaaatcatctctgatgg 776
Query: 887 caatttgaaggatgacagaaccggaactggtactttgtccaagtttggatgccagatgcg 946
|| ||||||||||||||||| |||||||||||||| || || ||||| || ||| ||||
Sbjct: 777 catcttgaaggatgacagaactggaactggtactttatcaaaatttgggtgtcaggtgcg 836
Query: 947 gttcaatttgcgtagaacttttccgctgctgacaacaaagaaagtattctggagaggggt 1006
|||||| ||||| | |||||||||||| || ||||||||||||||||||||| |||| ||
Sbjct: 837 gttcaacttgcgaaaaacttttccgcttcttacaacaaagaaagtattctggcgaggtgt 896
Query: 1007 tgttgaagaacttctgtggttcattagtggctcaacaaattgcaaggtccttcaggaaaa 1066
|||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 897 tgttgaagaactcctgtggttcattagtggttcaacaaatgccaaggtccttcaggaaaa 956
Query: 1067 gggcattcatatatgggacggcaatgcatccagagattaccttgatggtattgggttgaa 1126
||| |||||||| ||||| |||||||||||||| |||||||| ||| |||||||||||||
Sbjct: 957 gggaattcatatttgggatggcaatgcatccagggattacctcgatagtattgggttgaa 1016
Query: 1127 ggacagggaggagggtgacttaggacctgtttatggattccagtggaggcattttggtgc 1186
| |||| |||||||||||| | |||||||||||||||||||||||||| || ||||||||
Sbjct: 1017 gaacagagaggagggtgacctgggacctgtttatggattccagtggagacactttggtgc 1076
Query: 1187 taggtatactgacatgcatgctgactatactggccaaggatttgatcagttgttaga 1243
||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 1077 taggtatactgacatgcatgctgactacactggtcaaggatttgatcagttgttaga 1133
>30170.m014082 bifunctional dihydrofolate reductase-thymidylate
synthase, putative
Length = 1776
Score = 188 bits (95), Expect = 5e-47
Identities = 308/379 (81%)
Strand = Plus / Plus
Query: 873 attatctcagatggcaatttgaaggatgacagaaccggaactggtactttgtccaagttt 932
||||||||| |||||| ||||| |||||||| || || |||||||| | || || |||
Sbjct: 943 attatctcaaatggcaccttgaaagatgacaggacaggcactggtaccctatcaaaattt 1002
Query: 933 ggatgccagatgcggttcaatttgcgtagaacttttccgctgctgacaacaaagaaagta 992
|| | ||||||| || |||| |||| | | |||||||||| || |||||||||| |||
Sbjct: 1003 ggtggtcagatgcagtacaatctgcgcaaatcttttccgcttcttacaacaaagagagtg 1062
Query: 993 ttctggagaggggttgttgaagaacttctgtggttcattagtggctcaacaaattgcaag 1052
|| |||| || ||||||||||||||| ||||||| |||||||| ||||| ||| |||
Sbjct: 1063 ttttggatgggagttgttgaagaacttttgtggtttattagtggttcaaccaatgcaaag 1122
Query: 1053 gtccttcaggaaaagggcattcatatatgggacggcaatgcatccagagattaccttgat 1112
|| || || || || |||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 1123 gttctacaagagaaaggcattcatatatgggacggtaatgcatccagagactaccttgac 1182
Query: 1113 ggtattgggttgaaggacagggaggagggtgacttaggacctgtttatggattccagtgg 1172
||||||| |||| || | || ||| ||||| | ||||| | ||||| |||||||||
Sbjct: 1183 agtattggcctgaaagatatagaagagagtgacctgggacccatatatggcttccagtgg 1242
Query: 1173 aggcattttggtgctaggtatactgacatgcatgctgactatactggccaaggatttgat 1232
|| | ||||| ||||| ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 1243 agatactttggcgctagatatacagatatgcatgctgactactctggccaaggatttgat 1302
Query: 1233 cagttgttagatgttattg 1251
||| || |||| |||||||
Sbjct: 1303 cagctggtagacgttattg 1321
Score = 101 bits (51), Expect = 1e-20
Identities = 138/167 (82%)
Strand = Plus / Plus
Query: 192 caagttgttgtggctgctactagggacatgggtattggaaaagaagggaagttgccatgg 251
|||||||| || ||||||||| | || ||||| ||||| || || |||||||| ||||||
Sbjct: 262 caagttgtggttgctgctactcgtgatatggggattgggaaggatgggaagttaccatgg 321
Query: 252 agattgccttctgatctcaaattcttcaaggatgttactctgactacttctgattctgga 311
|||||||| |||||||| || || |||||||| |||| ||||||| || | |||||
Sbjct: 322 agattgccatctgatcttaagtttttcaaggagcttacattgactacatcaagtcctgga 381
Query: 312 agaaagaatgcagtaataatgggtagaaaaacatgggaaagtattcc 358
| || ||||||||| | |||||||| ||||||||||||||||||||
Sbjct: 382 aaaaggaatgcagttgtgatgggtaggaaaacatgggaaagtattcc 428