Jatropha Genome Database
- JcCA0238321.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0238321.10 + phase: 0 /partial
(1431 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006314 Casbene synthase, chloroplast precursor, putative 101 1e-20
29910.m000944 Terpinolene synthase, chloroplast precursor, putative 82 1e-14
29827.m002614 Casbene synthase, chloroplast precursor, putative 72 1e-11
30065.m001155 casbene synthase, putative 52 9e-06
>30169.m006314 Casbene synthase, chloroplast precursor, putative
Length = 1668
Score = 101 bits (51), Expect = 1e-20
Identities = 135/163 (82%)
Strand = Plus / Plus
Query: 395 ttttaagacaacatggatacaaaatgtcgtgcgatgtgttcaacaaattcaaagacaagg 454
||||||||||| ||||| ||||| || | ||||||||||| || |||||||| ||| |
Sbjct: 338 ttttaagacaatatggacacaaagtgccttgcgatgtgtttaataaattcaagaacagtg 397
Query: 455 atggaaaattcaagaaagctataagtaatgatgtgaagggcattcttagcttatatgaag 514
||||||| ||||||||| || ||||| |||| ||| ||||||||||||| ||||
Sbjct: 398 atggaaagttcaagaaaagcattgccaatgacctgaaaggccttcttagcttatacgaag 457
Query: 515 caagttttgtaagtgtgcacggagaagatattctagatgaagc 557
| |||||| |||||||||| |||||| ||||||||||||||||
Sbjct: 458 cgagttttctaagtgtgcatggagaaaatattctagatgaagc 500
Score = 65.9 bits (33), Expect = 6e-10
Identities = 78/93 (83%)
Strand = Plus / Plus
Query: 672 aagagttgaggccaggcaatacatctctgtttacgaagaagatgagtctcgaaatgaaac 731
|||||| ||||| ||||||||||| | | || ||||||||||||||||| ||||||||
Sbjct: 609 aagagtggaggctaggcaatacataagtttctatgaagaagatgagtctcgcaatgaaac 668
Query: 732 cctacttgagtttgcaaaattagatttcaatcg 764
|| ||| |||||||||| || ||||| |||||
Sbjct: 669 tcttcttaagtttgcaaagttggattttaatcg 701
Score = 52.0 bits (26), Expect = 9e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 1013 atgcatttgagaggtgcaacattagtgcaattgatcaactcccagattacatgaaagatc 1072
|||||||| | |||||| ||||| ||| |||||| |||| |||||||||||||||| ||
Sbjct: 977 atgcatttcaaaggtgcgacattgatgctattgatgaactaccagattacatgaaagttc 1036
Query: 1073 tctaca 1078
| ||||
Sbjct: 1037 tttaca 1042
>29910.m000944 Terpinolene synthase, chloroplast precursor, putative
Length = 1431
Score = 81.8 bits (41), Expect = 1e-14
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 499 cttagcttatatgaagcaagttttgtaagtgtgcacggagaagatattctagatgaagct 558
||||||||||| ||||| | ||| |||||||||| |||||||||||| ||||||||||
Sbjct: 352 cttagcttatacgaagccacctttctaagtgtgcatggagaagatattttagatgaagca 411
Query: 559 cttgcttttacaa 571
|||||||||||||
Sbjct: 412 cttgcttttacaa 424
>29827.m002614 Casbene synthase, chloroplast precursor, putative
Length = 1656
Score = 71.9 bits (36), Expect = 1e-11
Identities = 156/196 (79%)
Strand = Plus / Plus
Query: 379 gcacttctttttcgagttttaagacaacatggatacaaaatgtcgtgcgatgtgttcaac 438
|||||| | ||||||||| |||||||||||||| ||| | | || |||||||| |||
Sbjct: 340 gcacttttatttcgagttctaagacaacatggacgtaaagttccttgtgatgtgtttaac 399
Query: 439 aaattcaaagacaaggatggaaaattcaagaaagctataagtaatgatgtgaagggcatt 498
|||| ||| ||| | ||||| | |||||||||| ||| | | ||||||||| ||| |
Sbjct: 400 aaatacaaggacgacaatggagagttcaagaaagatatcaccagtgatgtgaaaggcctc 459
Query: 499 cttagcttatatgaagcaagttttgtaagtgtgcacggagaagatattctagatgaagct 558
|||||||| |||||||| |||| ||||| || |||||||| ||| ||||||||||
Sbjct: 460 cttagcttgtatgaagcttccgttgtgagtgttcatggagaagagattttagatgaagcc 519
Query: 559 cttgcttttacaaagc 574
|||| |||||||||||
Sbjct: 520 cttgtttttacaaagc 535
>30065.m001155 casbene synthase, putative
Length = 471
Score = 52.0 bits (26), Expect = 9e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 710 aagatgagtctcgaaatgaaaccctacttgagtttgcaaaattagatttcaatcgagtac 769
||||||||||| | |||||||| || ||| |||||||||| || ||||| ||||| |||
Sbjct: 179 aagatgagtcttgcaatgaaactctccttaagtttgcaaagttggattttaatcggttac 238
Query: 770 aattactacacagacaagagct 791
||||| | ||| |||||||||
Sbjct: 239 aattattgtacaaacaagagct 260