Jatropha Genome Database
- JcCA0237741.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0237741.10 - phase: 0 /pseudo/partial
(1373 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29844.m003173 protein transport protein sec23, putative 1346 0.0
>29844.m003173 protein transport protein sec23, putative
Length = 2349
Score = 1346 bits (679), Expect = 0.0
Identities = 1191/1363 (87%), Gaps = 1/1363 (0%)
Strand = Plus / Plus
Query: 8 ttgtggattcatctctcactaatgccatcagaactcatagagacctcattaatggtcgtg 67
||||||||||| ||||| |||| |||||||||||||||||||| | || |||| |||
Sbjct: 980 ttgtggattcagatctcagtaattccatcagaactcatagagacttaatcaatgccagtg 1039
Query: 68 caccataccatgacaaatcatgcagcttctacaatcgattgtcacagagattatctgatg 127
|||||||| || ||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1040 caccatactattggaaatcttgcagcttctacaatcgtttgtcacagagattatctgatg 1099
Query: 128 catctattgttcttgatttatttgcttgttctcttgatcaagtaggggtggcggagctaa 187
|||||||| |||||||||||||||||||||||||||||||| | || ||||| |||||||
Sbjct: 1100 catctattattcttgatttatttgcttgttctcttgatcaaattggagtggcagagctaa 1159
Query: 188 aagccccagttgagaggtcaggtggattcatgatgttaggagagttatttgagtcagatc 247
||| || ||||||| |||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 1160 aaggtcctgttgagaagtcaggtggatttatgatgttaggagagttatttgagtcggatc 1219
Query: 248 aattcaggaaatgcttgaggcacatttttagtcggggtgaagatgggagtttgaagatgt 307
|||| || || |||||| |||| ||||||||| | |||||| || | |||||| || |
Sbjct: 1220 aatttagaaagtgcttgcggcatatttttagttgtaatgaagagggtaatttgaaaattt 1279
Query: 308 attttgatgcaactattgaggtgatcaccacaagagatgtaaaaatctgtggagcacttg 367
|||||||||| ||||| |||||| ||||||||| ||||||||||| |||||||||||||
Sbjct: 1280 attttgatgcgactatcgaggtggtcaccacaaatgatgtaaaaatttgtggagcacttg 1339
Query: 368 gaccttgtgtttctcttcatnnnnnnnntgacttagtgagtgatcgtgaaactgggcagg 427
| |||||||||||||||| || ||||||||||| ||||| |||||| |||
Sbjct: 1340 ggccttgtgtttctcttcggcagaaaaatggtttagtgagtgaccgtgagactggggagg 1399
Query: 428 gtggcacgtatgcatggaaattgggcacactaacgaataaaacatgcatagctttcttct 487
| || || ||| |||||| ||||| || ||||| |||||||| ||||||||||| ||||
Sbjct: 1400 gcggtacctatatatggaagttgggtacgctaactaataaaacctgcatagcttttttct 1459
Query: 488 tcgaagtaggcgatgaacagaaggcgcatcctgggtctgcattttttatacaatttataa 547
|||||||||| ||||| ||||| || |||||||||||||||||||||||||| || ||||
Sbjct: 1460 tcgaagtaggtgatgagcagaaagctcatcctgggtctgcattttttatacagttcataa 1519
Query: 548 cacgataccgacatggaaacatgggaatccagaaaagagttacaacagctgcaagaagat 607
|||| || ||||||||||| | ||||||| |||||| ||||| ||||||||||||||||
Sbjct: 1520 cacgttatagacatggaaacttaggaatccggaaaagggttactacagctgcaagaagat 1579
Query: 608 gggttggaaacaagtcagcagaaatcactgctggttttgatcaggaagcagcagcttcag 667
||| ||||||||| |||||||||||||||||||||||||||||||||||||| || | |
Sbjct: 1580 gggctggaaacaaatcagcagaaatcactgctggttttgatcaggaagcagctgcagctg 1639
Query: 668 tcatggcaagacttgccattcaccgagcagagacatgttatgctcgagatgtcatcagat 727
||||||| ||||||||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 1640 tcatggccagacttgccattcaccgagcagaaacatgttatgctcgggatgttgtcagat 1699
Query: 728 ggttagatgacaaccttattcgttttgcttctaagtttggggactatatacaggaagatc 787
|| | ||||||| ||||||| ||||||||||||||||||| |||||||| ||||||||||
Sbjct: 1700 ggctggatgacagccttatttgttttgcttctaagtttggagactatatccaggaagatc 1759
Query: 788 catctaccttcaggttgtcaacaaacttttctctttaccctcagttcatgtattatttga 847
||||||||||||| |||||||||||| | |||||||| || |||||||||||||||||||
Sbjct: 1760 catctaccttcagattgtcaacaaacgtctctctttatccccagttcatgtattatttga 1819
Query: 848 ggaggtctcaatttattgatgttttcaatagttctcctgatgaaactgcatt-ttccact 906
||||||| |||||||||||||||||||| ||| |||| |||||||||||||| ||||||
Sbjct: 1820 ggaggtcccaatttattgatgttttcaacagtactccagatgaaactgcattcttccacc 1879
Query: 907 tgatgttaaaccgtgaaggggtggtaggttcccttatcatgatacaacctacactttttc 966
||||||||||||| ||||| || || |||||||| |||||||||||||||||| | ||||
Sbjct: 1880 tgatgttaaaccgggaaggagtagtgggttccctcatcatgatacaacctacattatttc 1939
Query: 967 agtattcatttgatggacctcctattccagtcctcttagatgttcgctcgatcgctgccg 1026
||||||| |||||||| || ||||||||||||||| ||||||||||||| || | ||||
Sbjct: 1940 agtattcctttgatggcccccctattccagtcctcctagatgttcgctccatatcagccg 1999
Query: 1027 atgttattttgctcttcgattcctacttccatgtggtgattcattatgggtctaagattg 1086
| || ||||| ||||| ||| | |||||||||||||||||||| |||||||| ||||| |
Sbjct: 2000 acgtaattttactctttgatgcttacttccatgtggtgattcactatgggtccaagatag 2059
Query: 1087 ctcagtggaggaaacttggctatcacaaagatccaaaccatgagaatctaagaaagttgt 1146
||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 2060 ctcagtggaggaaacttggatatcacagagatccaaaccatgagaatctgagaaagttgt 2119
Query: 1147 tggaagctcccgaagttgatgcggaacaattggtgggggaacgaataccagcacctaaac 1206
|||||||||| ||| ||||||| || |||||||||| ||| ||| | |||||||||||||
Sbjct: 2120 tggaagctccggaacttgatgcagagcaattggtggcggatcgagttccagcacctaaac 2179
Query: 1207 tgataaaatgcgaccaacacagtagtcaggctaggtttcttctggcaaagttgaatccat 1266
|||||||||||||||||||||| ||||||||||| |||||||| || |||||||||||||
Sbjct: 2180 tgataaaatgcgaccaacacagcagtcaggctagatttcttcttgcgaagttgaatccat 2239
Query: 1267 ctgttactcagaactcaacatacacagaaggatcagagatcattctcacggacgatttga 1326
|||||||||| || |||||||| | |||| || || | || | ||| || |||||||
Sbjct: 2240 ctgttactcacaattcaacatatatagaacattctgaagttatacacactgatgatttga 2299
Query: 1327 gtttgcaagattttatagatcacttgcaaacactggcagtgaa 1369
| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2300 gcttgcaagattttatagatcacttgcaaaccctggcagtgaa 2342