Jatropha Genome Database
- JcCA0237721.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0237721.10 - phase: 1 /partial
(1074 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m014270 hypothetical protein 125 6e-28
30147.m014269 conserved hypothetical protein 98 1e-19
30147.m014268 conserved hypothetical protein 52 7e-06
>30147.m014270 hypothetical protein
Length = 999
Score = 125 bits (63), Expect = 6e-28
Identities = 195/239 (81%)
Strand = Plus / Plus
Query: 606 gtcttctgcaatggtgctattcattggtatactgattttggcccgtctttttatttcgat 665
|||||||| || || ||||| |||||||||||||||| || || || |||| ||| |||
Sbjct: 451 gtcttctggaacggggctatccattggtatactgattccggtccttccttttgttttgat 510
Query: 666 gttgataaagaacaagtcaaagaaatggcaatgcctgcaactccagaggaatggtatcgg 725
|||||| | |||||| | ||||||| |||||||| ||| |||||| || |||||||||
Sbjct: 511 gttgatcaggaacaaatacgagaaatgccaatgcctccaattccagatgattggtatcgg 570
Query: 726 aggagggtgctttattttcgagagtgtagaggacatttatatctggttgagatttataat 785
|||||||| | |||||| | |||| | ||||||||||| |||| ||||||| ||| ||
Sbjct: 571 aggagggttatatattttggggagtctggaggacatttaaatcttattgagatctatcat 630
Query: 786 gctccctctacaaaatttaatgtgtgggaaatggagaaagactactctggatggattgt 844
| || ||||| ||||||||||||| ||| ||| |||||||||||| |||||| ||||
Sbjct: 631 catgccgctacacaatttaatgtgtgtgaattggcgaaagactactcaggatggtttgt 689
Score = 113 bits (57), Expect = 2e-24
Identities = 109/125 (87%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 5 gagacaattgccaacaacgatgatctctttaatccagatccttctctgtctacccatcaa 64
|||||||||||||||||| |||||||||| || ||| ||||| || ||||| ||||||||
Sbjct: 61 gagacaattgccaacaactatgatctctt-aacccatatcctgctttgtctgcccatcaa 119
Query: 65 atctctcttcaaattcaagtcggtgtcaaagcactggctctctctcatcaccaatcctct 124
||||||| |||||||||| | || |||||||| ||||| ||||||||| |||||||||
Sbjct: 120 atctctcctcaaattcaattgtgtatcaaagcattggctatctctcatctccaatcctca 179
Query: 125 cttct 129
|||||
Sbjct: 180 cttct 184
>30147.m014269 conserved hypothetical protein
Length = 210
Score = 97.6 bits (49), Expect = 1e-19
Identities = 103/121 (85%)
Strand = Plus / Plus
Query: 585 gacattggaacccatgacggtgtcttctgcaatggtgctattcattggtatactgatttt 644
||||||||| ||||| ||| ||||||| || |||||||||||||||||||||||||
Sbjct: 73 gacattggagtccatggcggaatcttctgtaacggtgctattcattggtatactgattca 132
Query: 645 ggcccgtctttttatttcgatgttgataaagaacaagtcaaagaaatggcaatgcctgca 704
|| || ||||| | ||| ||||||||| |||||||| ||| ||||||| |||||||||||
Sbjct: 133 ggtccttctttgtgttttgatgttgatcaagaacaaatcagagaaatgccaatgcctgca 192
Query: 705 a 705
|
Sbjct: 193 a 193
>30147.m014268 conserved hypothetical protein
Length = 228
Score = 52.0 bits (26), Expect = 7e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1022 aatcataaggtataatttgaaggataagagttttaagaagct 1063
||||||| ||||||||||||| |||| ||||||||||||||
Sbjct: 117 aatcatacggtataatttgaaagatagaagttttaagaagct 158