Jatropha Genome Database

JcCA0235871.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0235871.10 + phase: 0 /partial
         (622 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29842.m003713 S-locus-specific glycoprotein S13 precursor, putative   135   3e-31

>29842.m003713 S-locus-specific glycoprotein S13 precursor, putative
          Length = 2493

 Score =  135 bits (68), Expect = 3e-31
 Identities = 179/216 (82%)
 Strand = Plus / Plus

                                                                        
Query: 396  gaagttttcagggctgaagttgccagatagttcacagtttttggtgaacaggacagctat 455
            |||||||||||| || |||||||| |||||||| |||| ||| || |||| ||  |||| 
Sbjct: 1038 gaagttttcaggacttaagttgccggatagttcgcagtatttagtcaacaagaatgctac 1097

                                                                        
Query: 456  gtctccagttgagtgtgaggaagcttgccttaggaactgttcttgcatggcttatgctaa 515
              | ||||| |||||||||   |||||||  ||||||||||| |||||||||||||||||
Sbjct: 1098 cacaccagtagagtgtgagacggcttgccggaggaactgttcctgcatggcttatgctaa 1157

                                                                        
Query: 516  gactgaggttagtggttgtgtggcttggtatggggacttgctagatataaaaatgtacaa 575
            |||||| |||||||| ||||||||||||| ||| |||||||| ||||||| |  ||| | 
Sbjct: 1158 gactgaagttagtggctgtgtggcttggtttggagacttgcttgatataagagagtatag 1217

                                                
Query: 576  tgaaggtgggcaagtattgtatataaggatggatgc 611
            | ||||||| |||||  ||||||||| | |||||||
Sbjct: 1218 taaaggtggacaagtgctgtatataaaggtggatgc 1253