Jatropha Genome Database
- JcCA0231751.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0231751.10 + phase: 2 /partial
(1216 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m014074 conserved hypothetical protein 1164 0.0
30072.m000980 conserved hypothetical protein 54 2e-06
30152.m002410 synaptotagmin, putative 52 8e-06
>30147.m014074 conserved hypothetical protein
Length = 3135
Score = 1164 bits (587), Expect = 0.0
Identities = 1058/1215 (87%)
Strand = Plus / Plus
Query: 2 ggcgctcgtggcttgctgcctatgaaaaacagaggtggaggtaaggggtccaccgatgct 61
||||| ||||||||||| |||||||||||| | |||||| ||||||||||| ||||||
Sbjct: 1918 ggcgcacgtggcttgcttcctatgaaaaaccaatgtggagtaaaggggtccactgatgct 1977
Query: 62 tactgtgttgctaaatatggcaaaaagtgggttcgaacgagaactattactgacagtttt 121
|||||||| |||||||| || || |||||||| || |||||||| || || |||||||||
Sbjct: 1978 tactgtgtagctaaatacggaaagaagtgggtccgcacgagaacaatcacggacagtttt 2037
Query: 122 gatccacgttggaacgaacagtacacgtggcaagtttatgacccttgcaccgtcttgact 181
|||||||||||||| ||||| ||||||||||||||||||||||||||||| || |||||
Sbjct: 2038 gatccacgttggaatgaacaatacacgtggcaagtttatgacccttgcactgttttgacc 2097
Query: 182 attggtgtctttgacaactggcgtatgtttgccgatccgtcagaagagaagggtgacaac 241
|||||||| || |||||||||||||||||||| || || |||||||||||| || | |
Sbjct: 2098 attggtgtattcgacaactggcgtatgtttgctgacccatcagaagagaagccggatagc 2157
Query: 242 cgtatagggaaagtccggatacgcgtatctacgctggagagcaataaggtgtatactaat 301
|||||||| ||||| |||||||||||||||||||| |||||||| ||||| ||||| |||
Sbjct: 2158 cgtataggaaaagtacggatacgcgtatctacgcttgagagcaacaaggtctatacaaat 2217
Query: 302 tcttatcctttgttggttttattaagaaccggattaaagaaaatgggcgagatcgaagta 361
|| |||||| | | |||||||||||| |||| || || |||||||| ||||| ||||||
Sbjct: 2218 tcctatcctctactagttttattaagatccgggttgaaaaaaatgggtgagattgaagta 2277
Query: 362 gcggttcggtttgcctgcccgagtttgttacctgatacttgtgctgtatacggtcagcca 421
|||||||||||||||||||| ||||||||||| ||||||||||||| |||||| || |||
Sbjct: 2278 gcggttcggtttgcctgcccaagtttgttacccgatacttgtgctgcatacggccaacca 2337
Query: 422 ttgcttcctagaatgcactatctccgcccacttggggtggcccaacaagaagcactgcgt 481
||||||||||||||||||||||| ||||||||||| || || ||||| || |||||||||
Sbjct: 2338 ttgcttcctagaatgcactatctacgcccacttggtgttgcacaacaggaggcactgcgt 2397
Query: 482 ggagccgccaccaaaatggttgcttcatggctcgctcgctccgaaccaccgttagggcct 541
|| || || || ||||||||||| |||||||| || || ||||| || | || || | |
Sbjct: 2398 ggtgctgctactaaaatggttgcatcatggctggcgcggtccgagcctgcattgggtcat 2457
Query: 542 gaggtagtacagtacatgttggatgcagactctcacacctggagcatgagaaaaagcaag 601
||||| || ||||| ||||||||||| || |||||||| ||||||||| |||| || |||
Sbjct: 2458 gaggtggttcagtatatgttggatgcggattctcacacttggagcatgcgaaagagtaag 2517
Query: 602 gctaattggtttcggattgtagctgttcttgcatgggcagtcgggttggcgaaatggttg 661
|||||||||||||| ||||| || |||||||||||||| || ||| |||||||||||||
Sbjct: 2518 gctaattggtttcgaattgttgcggttcttgcatgggctgtggggctggcgaaatggtta 2577
Query: 662 cataatatccggagatggaaaaacccagttacaacagtactggttcatctcttgtatctg 721
||| |||| || |||||||||||||| |||||||||||| | |||||| | |||||| ||
Sbjct: 2578 catgatattcgaagatggaaaaacccggttacaacagtattagttcatgttttgtatttg 2637
Query: 722 gtacttgtttggtacccggatttgattgtcccaaccgggttcttatacgtgtttctgatt 781
|| |||||||||||||| |||||| | || || ||||||||||| |||||| || |||||
Sbjct: 2638 gtgcttgtttggtaccccgatttggtcgttcctaccgggttcttgtacgtggttttgatt 2697
Query: 782 ggtgtgtggtattataggttcaggcccaaaataccagcgggaatggatattcggttatct 841
||||||||||| |||||||| ||||| || ||||||||||| |||||||| ||||||||
Sbjct: 2698 ggtgtgtggtactataggtttaggcctaagataccagcgggtatggatataaggttatct 2757
Query: 842 caatcggagtcagttgacccagatgagttagatgaagaatttgacacaataccaagctca 901
||| |||| |||||||||| |||||| ||||||| |||||||| |||||||||||||||
Sbjct: 2758 caagcggaaacagttgacccggatgagctagatgaggaatttgatacaataccaagctca 2817
Query: 902 aaaccaccagatataattcgggcaagatatgaccggttacggattttggcagcccgggtc 961
| |||||| || ||||||||| ||||||||| |||||||||| || ||||||||||||
Sbjct: 2818 agaccacctgaattaattcgggtcagatatgacaggttacggatgttagcagcccgggtc 2877
Query: 962 caaacagtattgggagattttgcgacccaaggagagcgggttcaagcattagtaagttgg 1021
|||||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 2878 caaacagttttgggtgattttgcgacccaaggtgagcgggttcaagcattagtgagttgg 2937
Query: 1022 agggacccaagagcgacaaaattattcatagcggtgtgtttgactataaccataattctt 1081
||||| ||| | || ||||| ||||||||||| ||||||||| |||||||||||||||||
Sbjct: 2938 agggatccacgggccacaaagttattcatagcagtgtgtttggctataaccataattctt 2997
Query: 1082 tatgcagtaccaccaaaaatggttgctgtggccttgggattctactatttacggcaccca 1141
||| || |||||||||||||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 2998 tatatggtgccaccaaaaatggttgctgtagccttaggattctactatttgaggcaccca 3057
Query: 1142 atgttcagggatccaatgccaccggctagcttgaacttcttccggcggcttccaagctta 1201
||||| ||||| || |||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 3058 atgtttagggaccccatgccaccggctagtttgaactttttccggcggctaccaagctta 3117
Query: 1202 tcggatcggttaatg 1216
|||||||||||||||
Sbjct: 3118 tcggatcggttaatg 3132
>30072.m000980 conserved hypothetical protein
Length = 3225
Score = 54.0 bits (27), Expect = 2e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 969 tattgggagattttgcgacccaaggagagcgggttcaagcattagtaagttggagggacc 1028
||||||||||||| ||||| ||||| || |||| ||||||||||| | |||||||| |
Sbjct: 2975 tattgggagatttggcgacgcaaggtgaaagggtgcaagcattagtgacatggagggatc 3034
Query: 1029 caagagcgaca 1039
|||| ||||||
Sbjct: 3035 caagggcgaca 3045
>30152.m002410 synaptotagmin, putative
Length = 3150
Score = 52.0 bits (26), Expect = 8e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 56 gatgcttactgtgttgctaaatatggcaaaaagtgggttcgaacgagaac 105
|||||||||||||| ||||| ||||| | |||||||||||||| |||||
Sbjct: 1978 gatgcttactgtgtagctaagtatggtcagaagtgggttcgaactagaac 2027