Jatropha Genome Database
- JcCA0229931.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0229931.10 - phase: 1 /partial
(1800 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29827.m002528 Transcription factor AtMYC2, putative 462 e-129
28124.m000246 MYC transcription factor, putative 100 6e-20
29742.m001404 DNA binding protein, putative 88 2e-16
29883.m002023 DNA binding protein, putative 58 2e-07
>29827.m002528 Transcription factor AtMYC2, putative
Length = 1992
Score = 462 bits (233), Expect = e-129
Identities = 741/907 (81%), Gaps = 15/907 (1%)
Strand = Plus / Plus
Query: 168 atgacggactatcgaatagcatcgacgatgaatctgtggacagacgataactcatccgtc 227
|||||||||||| || ||||| |||| |||||||| |||| || || ||| |||| |||
Sbjct: 1 atgacggactatagagtagcaccgacaatgaatctatggagtgatgacaacgcatcagtc 60
Query: 228 atggaagctttcatgaactcggatctctcggctctctggccgccgccgcagtcg---gct 284
|||||||| || |||||| | ||||||||||||||||||| || | || ||| |||
Sbjct: 61 atggaagcctttatgaacaccgatctctcggctctctggcaaccccaacaatcgtctgct 120
Query: 285 gcttccacttctacccctgcgccaccaa---gcgccgaccccaacaagactg---taatc 338
|||||||||||||||||| ||| || | || | ||||| || | ||| | |||
Sbjct: 121 gcttccacttctacccctccgcttcccaacagcactgaccctaatagagctgctattatc 180
Query: 339 aaccaatctcagc---ctatctttaatcaggaaacgctgcagcagcgactcctgaccttg 395
||||||||||||| || |||| || || ||||| || || ||||| |||| | |||||
Sbjct: 181 aaccaatctcagcagcctctcttcaaccaagaaacccttcaacagcgcctccaggccttg 240
Query: 396 atcgaaggggccagagagagctggacctacgctatattttggcaatcgtcgtatgattat 455
|||||||| ||||| || ||||||||||||||||| || ||||||||| ||||| |||
Sbjct: 241 atcgaaggcgccagggaaagctggacctacgctatcttctggcaatcgagttatgactat 300
Query: 456 aacggt---tcggtgctaggttggggtgatgggtactacaaaggagaggaggataaaggc 512
||| || || | || ||||||||||| || |||||||| || || ||||||||
Sbjct: 301 tcaggtgcttctgttttgggctggggtgatggatattacaaaggtgaagaagataaaggg 360
Query: 513 aaaggcaaatctaaaagtacgagttcttctgctgtagagcaggagcaccgtaagaaggtg 572
|||||||||||||| ||||| || ||||| || || || ||||||||||| ||||||
Sbjct: 361 aaaggcaaatctaagagtaccagctcttcaattgctgaacaagagcaccgtaaaaaggtg 420
Query: 573 ctccgcgagcttaattcgttgatctcaggttctaatacggtcaccgacgatgcggttgat 632
| || ||||||||||||||||| |||||| ||| | | ||||||||||||| ||||||
Sbjct: 421 ttacgtgagcttaattcgttgatttcaggtcctactgctatcaccgacgatgccgttgat 480
Query: 633 gaagaagtcactgatactgagtggttctttcttgtttccatgactcaatcatttgttaat 692
|||||||| || ||||| || |||||||||||||||||||||||||| || |||||||||
Sbjct: 481 gaagaagttaccgatacggaatggttctttcttgtttccatgactcagtcttttgttaat 540
Query: 693 ggaggtgggcttccgggtcatgctttcttcaatgggagtccggtctgggttgctgggtct 752
|| |||||| | || ||||| ||||| ||||| |||||||||||||||||||||||||
Sbjct: 541 ggtggtgggttacctggtcaagcttttttcaacgggagtccggtctgggttgctgggtta 600
Query: 753 gaccggttatctgcatcgccatgtgagcgggctagacaaggtcaagtttttgggttacag 812
|| |||||| || | ||| | ||||| ||||| ||||| ||||| |||||||||| |||
Sbjct: 601 gaacggttagcttcgtcgtcttgtgaacgggccagacagggtcagatttttgggttgcag 660
Query: 813 acgttggtttgtatcccatcggcaaatggagttgtcgaacttggttcaacggagctgatt 872
|| ||||||||||| || || || ||||||||||| || || |||||||| ||| |||||
Sbjct: 661 actttggtttgtattccgtcagccaatggagttgtggagctgggttcaactgagttgatt 720
Query: 873 tatcaaagctcggatctgatgaataaggttagggttctgtttaatttcaatagtgttgag 932
||||| || |||||||||||||||||||||||| |||||||||| |||||| |||||
Sbjct: 721 tatcagagtatagatctgatgaataaggttagggttttgtttaattttaatagtcttgag 780
Query: 933 gtgggttcatggccgatgggagcaaatcctgaccagggggagaacgatacttcctctctt 992
| || || ||||||||||| || ||||||||||| || ||||| ||| | ||||| |||
Sbjct: 781 gcaggctcgtggccgatgggtgcgaatcctgaccaaggtgagaatgatccatcctcactt 840
Query: 993 tggatcagtgatccatcgcaaagtgggattgagatgaaagatggaaatagtacagttcca 1052
||||| ||||||||||| || |||||||||||||| || ||||| |||||||||||||||
Sbjct: 841 tggattagtgatccatctcagagtgggattgagatcaaggatgggaatagtacagttcca 900
Query: 1053 tcatcag 1059
|| ||||
Sbjct: 901 tcttcag 907
Score = 335 bits (169), Expect = 6e-91
Identities = 488/599 (81%), Gaps = 24/599 (4%)
Strand = Plus / Plus
Query: 1202 acaaagctttttcactcgcgaattgaattttggggattatagtggttttgatggaagtag 1261
|||||||||||| ||||| |||||||| |||||||| |||| ||| ||||||||||| |
Sbjct: 1023 acaaagcttttttactcgtgaattgaactttggggaatataatggatttgatggaagga- 1081
Query: 1262 tgctagaaatgggaattctaatttgttgaagccagaatcaggggagatattgaattttgg 1321
| |||||| | ||| | |||||||| ||||| ||||||||||||||||||||
Sbjct: 1082 --------acgggaatacgaatgttttgaagccggaatcgggggagatattgaattttgg 1133
Query: 1322 ggagagtaaaagaagttcttgtagtgccaatggaaatttcttttcaggtcattcacagtt 1381
||||||||| || ||||||| |||||| ||||||||||| ||| | |||||||| |||||
Sbjct: 1134 ggagagtaagaggagttcttatagtgcaaatggaaatttgtttcccggtcattctcagtt 1193
Query: 1382 tactgcagaggataataataacaataatagtaataagaagaaaagatctcccacttccag 1441
| || ||||||| || |||| ||||||||||||||| ||||| ||
Sbjct: 1194 tgctacagaggagaagaatac---------------gaagaaaagatctcctacttcgag 1238
Query: 1442 aggtagtaacgaagaaggaatgctttcctttacttctggtgtgatcttgccttcttctgg 1501
||||| || |||||||| ||||| || |||||||| || || | ||||||||||||||
Sbjct: 1239 gggtagcaatgaagaagggatgctctcgtttacttcgggcgttgttttgccttcttctgg 1298
Query: 1502 tgtggtgaaatctagtggcggtacaggagattcagatcattctgatcttgaagcctctgt 1561
| ||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 1299 cggggtgaaatcaagtggtggcacaggggattcagatcactctgatcttgaagcctctgt 1358
Query: 1562 agttagagagacggacagcagcagagttatagagcccgaaaagaggccgcgaaagcgggg 1621
||||||||||| || ||||| |||||| ||||||| ||||||||||| | || || ||
Sbjct: 1359 tgttagagagacagagagcagtagagttgtagagcctgaaaagaggccaaggaaacgcgg 1418
Query: 1622 aagaaagccagcaaatggaagagaagaaccgttgaatcatgttgaagcagagagacaacg 1681
||||| || || ||||||||||| || || |||||||||||||||||||||| || |
Sbjct: 1419 gagaaaaccggctaatggaagagaggagcctctgaatcatgttgaagcagagaggcagag 1478
Query: 1682 aagagagaagctcaatcaaaggttttatgcattgcgagctgtggttccgaatgtgtccaa 1741
||||||||| ||||| || || || ||||| |||||||||||||||| ||||| || ||
Sbjct: 1479 aagagagaaactcaaccagagattctatgctctgcgagctgtggttcccaatgtttcaaa 1538
Query: 1742 gatggataaagcttcactccttggcgatgcaatttcttatataaaggagcttaggacaa 1800
||||||||||||||| || ||||| ||||| || || ||||| ||||||||||| ||||
Sbjct: 1539 gatggataaagcttcgcttcttggtgatgccatatcatatatcaaggagcttagaacaa 1597
>28124.m000246 MYC transcription factor, putative
Length = 288
Score = 99.6 bits (50), Expect = 6e-20
Identities = 113/134 (84%)
Strand = Plus / Plus
Query: 617 cgacgatgcggttgatgaagaagtcactgatactgagtggttctttcttgtttccatgac 676
|||||||| |||||||||||||| || ||||| | |||| ||||||||||||||||||
Sbjct: 108 cgacgatgtcgttgatgaagaagttaccgatacgaaatggtcctttcttgtttccatgac 167
Query: 677 tcaatcatttgttaatggaggtgggcttccgggtcatgctttcttcaatgggagtccggt 736
||| || ||| ||||||| |||||| | || ||||| ||||| ||||| |||||| ||||
Sbjct: 168 tcagtcttttattaatggtggtgggttacctggtcaagcttttttcaacgggagttcggt 227
Query: 737 ctgggttgctgggt 750
|||||| ||||||
Sbjct: 228 atgggttactgggt 241
>29742.m001404 DNA binding protein, putative
Length = 1848
Score = 87.7 bits (44), Expect = 2e-16
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 1629 ccagcaaatggaagagaagaaccgttgaatcatgttgaagcagagagacaacgaagagag 1688
||||||||||||||||||||||| | ||||||||||| ||||| || || || |||||
Sbjct: 1309 ccagcaaatggaagagaagaaccactcaatcatgttgaggcagaaaggcagcggcgagag 1368
Query: 1689 aagctcaatcaaaggttttatgcattgcgagctgtggttccgaatgtgtccaagatggat 1748
||||| || || |||||||||| || |||||||| ||||| ||| | |||||||||||
Sbjct: 1369 aagctaaaccagcggttttatgctttacgagctgttgttcctaatatttccaagatggac 1428
Query: 1749 aaagcttc 1756
|| |||||
Sbjct: 1429 aaggcttc 1436
>29883.m002023 DNA binding protein, putative
Length = 1512
Score = 58.0 bits (29), Expect = 2e-07
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 1623 agaaagccagcaaatggaagagaagaaccgttgaatcatgttgaagcagagagacaacga 1682
|||||||| || ||||| || ||||| || |||||||||| ||||||||| | || |
Sbjct: 1036 agaaagcctgcgaatgggagggaagagcctctgaatcatgtggaagcagagcgtcagagg 1095
Query: 1683 agagagaagctcaatcaaaggttttatgcattgcgagctgt 1723
||||||||||||||||| || || |||||| || |||||||
Sbjct: 1096 agagagaagctcaatcagagattctatgcactgagagctgt 1136