Jatropha Genome Database
- JcCA0225811.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0225811.10 + phase: 0 /partial
(443 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29648.m002004 metal transporter, putative 224 3e-58
29648.m002003 metal transporter, putative 159 2e-38
>29648.m002004 metal transporter, putative
Length = 1587
Score = 224 bits (113), Expect = 3e-58
Identities = 320/389 (82%)
Strand = Plus / Plus
Query: 25 tatgagcttctgtgggtcattcttattggtttgatttttgctctcattattcagtctcta 84
|||||||||||||||||||| ||||||| | ||||||||||||||||| ||||| ||
Sbjct: 217 tatgagcttctgtgggtcatacttattgcactcatttttgctctcattatccagtcgctc 276
Query: 85 gctgcaaatcttggtgtgagtacaggaaagcacctgtctgaattgtgcaaggcagaatac 144
||||||||||||||||| || || |||||||| || || || | |||||||| ||||||
Sbjct: 277 gctgcaaatcttggtgtaagcaccggaaagcatctttcagagctatgcaaggctgaatac 336
Query: 145 ccaaaatatgtcaagctttgtttatggttactagcagaggtagcagtaatagctgcagat 204
|||||| |||||||| ||| | ||||| || || ||| ||||||| || ||||| |||
Sbjct: 337 ccaaaacatgtcaagtattgcctgtggttgctggctgagatagcagtcattgctgctgat 396
Query: 205 ataccagaagtgattggaacagcttttgcactaaacatactatttaatatcccagtatgg 264
||||||||||||||||| ||||||||||||||||| ||| | || | |||||| | |||
Sbjct: 397 ataccagaagtgattgggacagcttttgcactaaatatattgttccacatcccactgtgg 456
Query: 265 gttggagttctgattactggctgtagcactctcctcctcctcggtctacagagatacggg 324
||||||||||| ||||| |||||||||| |||| || || ||||||| ||| |||
Sbjct: 457 gttggagttctctgcactggtcttagcactctcatccttcttggcctacagaaatatggg 516
Query: 325 gtgagaaaactggaattgttgatagcaatattggtgtttataatggctggatgtttcttt 384
|| || ||||| ||| |||| |||||| | ||||| ||| | ||||| | ||||||||||
Sbjct: 517 gtaaggaaacttgaaatgttaatagcagtgttggtctttgtgatggccgcatgtttcttt 576
Query: 385 ggtgaaatgagttatgtaaagcctcctgc 413
| |||||||||| | ||| ||||||||||
Sbjct: 577 gctgaaatgagtcacgtacagcctcctgc 605
>29648.m002003 metal transporter, putative
Length = 1497
Score = 159 bits (80), Expect = 2e-38
Identities = 323/404 (79%)
Strand = Plus / Plus
Query: 10 ggagcaaaccacggttatgagcttctgtgggtcattcttattggtttgatttttgctctc 69
||||| ||||| || |||||||| |||||||| || || ||||| | ||||||||||||
Sbjct: 241 ggagctaaccatggatatgagctgctgtgggttatactcattggacttatttttgctctc 300
Query: 70 attattcagtctctagctgcaaatcttggtgtgagtacaggaaagcacctgtctgaattg 129
|| || || || || || |||||||||||||| || || |||||||| ||||| |||||
Sbjct: 301 ataatccaatcactcgcagcaaatcttggtgtcagcactggaaagcatctgtcagaatta 360
Query: 130 tgcaaggcagaatacccaaaatatgtcaagctttgtttatggttactagcagaggtagca 189
||||| || || || |||||||| || || ||| | ||||| || || ||| |||||
Sbjct: 361 tgcaaagctgagtatccaaaatacgttaaatattgcctgtggttgctggctgagatagca 420
Query: 190 gtaatagctgcagatataccagaagtgattggaacagcttttgcactaaacatactattt 249
|| |||||||| |||||||| |||||||| || |||||||||||||| |||||| ||||
Sbjct: 421 gtcatagctgccgatatacccgaagtgatcgggacagcttttgcactgaacatattattc 480
Query: 250 aatatcccagtatgggttggagttctgattactggctgtagcactctcctcctcctcggt 309
| |||||| | |||||||||||||| |||||| ||| ||||||||| |||| ||
Sbjct: 481 gacatcccactgtgggttggagttctctgtactggtgttagtactctcctcttccttggc 540
Query: 310 ctacagagatacggggtgagaaaactggaattgttgatagcaatattggtgtttataatg 369
|| |||||||| ||||| || || || ||| |||||||||||| | |||||| | |||
Sbjct: 541 ctgcagagatatggggtaaggaagcttgaaatgttgatagcaacgctagtgtttgtgatg 600
Query: 370 gctggatgtttctttggtgaaatgagttatgtaaagcctcctgc 413
|| | || ||||||||||||||||| | ||||| ||||||||
Sbjct: 601 gccgcttgcttctttggtgaaatgagccacgtaaaacctcctgc 644