Jatropha Genome Database
- JcCA0224481.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0224481.10 - phase: 1 /pseudo/partial
(1001 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29647.m002049 conserved hypothetical protein 1120 0.0
>29647.m002049 conserved hypothetical protein
Length = 2874
Score = 1120 bits (565), Expect = 0.0
Identities = 893/1000 (89%), Gaps = 3/1000 (0%)
Strand = Plus / Plus
Query: 1 atatactgattttcacatgacatcaagtccgacagccgagcaaatagttaactatctaat 60
||||||||| |||||||||| ||||||||| ||||| || |||||||||||||||||| |
Sbjct: 618 atatactgactttcacatgagatcaagtccaacagctgaacaaatagttaactatcta-t 676
Query: 61 gccaacagtgcgaggcttctttacagtttcttcagtcattatgccagcaaaagttgttca 120
||||||| ||||| |||||||||||||||||||||||||| || || ||||| ||||| |
Sbjct: 677 gccaacaatgcgaagcttctttacagtttcttcagtcattgtgtcaacaaaaattgttta 736
Query: 121 gggagcgccttcttagaaacaaggaactatgtggaaagggtggtgttctttttctggctc 180
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 737 gggaacgcctacttagaaacaaggaactatgtggaaagggtggtgttctttttctggccc 796
Query: 181 atggcatcttgaagttaaaaatcacagctccctttgtagagtcatctacagttgtggctg 240
| | ||||||||||||||| || | | |||| ||| ||||||| ||||||||||| ||||
Sbjct: 797 aggccatcttgaagttaaatattatacctccttttatagagtcttctacagttgttgctg 856
Query: 241 ctgtatcaagactaaaagctaaagtgctatcaattctattgcatctgtgtgaagcagaaa 300
||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 857 ctgtatccagactgaaagctaaagtactatctattctattgcatctgtgtgaagcagaaa 916
Query: 301 gcatttcttaccttgatgaggttgcaagttctccaggaagcctagatttggccaaatctg 360
|||| ||||||||||||||||||||||| |||||||||||| | ||||||||||| ||||
Sbjct: 917 gcatatcttaccttgatgaggttgcaagctctccaggaagctttgatttggccaagtctg 976
Query: 361 ttgctttagaggttcttgaattattaaaggctgcacttagtaaagatcccaaacatctca 420
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 977 ttgcattagaggttcttgaattattaaaggctgcacttagtaaagatcccaaacatctta 1036
Query: 421 gcgcttgttctgaaagaacatttcccatggggcttctgcgactcaatgcaatgcgtttgg 480
||| ||||||| ||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 1037 ctgctagttctgagagaacttttcccatggggcttctgcgactcaatgcaatgcgtctgg 1096
Query: 481 ccgatattttctcagatgattcaaattttcgatcttacattacaacatgctttaccaaag 540
| |||||||||||||||||||| |||||||| ||||| ||||||||||||||||| || |
Sbjct: 1097 ctgatattttctcagatgattccaattttcggtcttatattacaacatgctttacaaagg 1156
Query: 541 ttctgactgccatattttcactccctcatggagagtttttatccatttggtgctcctctg 600
|||||||||||||||||||||| |||||||||||||| |||||||||||||| || ||||
Sbjct: 1157 ttctgactgccatattttcactgcctcatggagagttcttatccatttggtgttcttctg 1216
Query: 601 aacttccaccaagggaggaggatgctactctggaatacgatgtatttacagcggctggat 660
||||||||| || ||||| ||||||||||| || | ||| |||||| ||| |||||||
Sbjct: 1217 aacttccactgagagaggaagatgctactctcgagtttgatatatttatagcagctggat 1276
Query: 661 ggtttttggatacattttcatcattggaccaatcaagtgctataaatttagagattactt 720
|| ||||||| ||| | |||||| || ||| ||||| |||| |||||| ||| ||||||
Sbjct: 1277 gggttttggacacaatctcatcactgaacctatcaaatgctctaaattcagaaattactc 1336
Query: 721 taattcctagcaacatgccccaagctacatatgctcatcagaggacatcattatttgtca 780
|||| || || ||||||||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 1337 taatccccagtaacatgccccaagctacctatgctcatcagagaacttcattatttgtca 1396
Query: 781 aagtaattgccaaccttcattgtttcgtccccaacatttgtgaagaacaggaaagaaatc 840
||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 1397 aagtaatcgccaaccttcattgttttgtccccaatatttgtgaagagcaggaaagaaatc 1456
Query: 841 tcttccttcacaagttctgtgagtgcatgcggatgaatccatctgaatccttgcctggat 900
| || ||||| |||||| |||||||||||||||| ||||||||||| | ||||||| ||
Sbjct: 1457 tttttcttcataagttccttgagtgcatgcggatggatccatctgaaactttgcctgaat 1516
Query: 901 tttcttttacttctggtgctaacaaagcgatcactgtttgcaggaacctgc--tcattat 958
||||||||||||| | |||||||||||| | ||||||||||||||||||| |||||
Sbjct: 1517 tttcttttacttcagatgctaacaaagccaatactgtttgcaggaacctgcgttcattgc 1576
Query: 959 taagtcatgcagagtctctgactcctaactttttgaatga 998
|||| |||||||| ||||||| ||||||||||||||||||
Sbjct: 1577 taagccatgcagaatctctgattcctaactttttgaatga 1616