Jatropha Genome Database

JcCA0220511.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0220511.10 - phase: 1 /partial/short
         (146 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m010986 glyceraldehyde 3-phosphate dehydrogenase, putative       70   4e-12

>30190.m010986 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 888

 Score = 69.9 bits (35), Expect = 4e-12
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                              
Query: 68  tgggagcatccttgctgggtgcagaaataattaccttctttgcaccaccct 118
           |||||||||| ||||| || ||||| |||||||||||||||||||||||||
Sbjct: 268 tgggagcatctttgctcggggcagagataattaccttctttgcaccaccct 218



 Score = 60.0 bits (30), Expect = 4e-09
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 1   gtaatagagtggacagtggtcatgagaccttcaacaataccaaatttgtc 50
           ||||| ||||||||||| ||||| ||||| ||| ||||||||||||||||
Sbjct: 425 gtaatggagtggacagttgtcataagaccctcagcaataccaaatttgtc 376