Jatropha Genome Database

JcCA0216521.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0216521.20 + phase: 0 /pseudo/partial
         (193 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29662.m000472 Auxin efflux carrier component, putative                153   4e-37

>29662.m000472 Auxin efflux carrier component, putative
          Length = 1907

 Score =  153 bits (77), Expect = 4e-37
 Identities = 134/153 (87%)
 Strand = Plus / Minus

                                                                        
Query: 1    atggccacatgtagaagagtgccacgaacaccaatagcaatggaggttgcagcaatcaca 60
            ||||||||||| ||||| | |||||||| |||||||||||| ||||| |||||||| || 
Sbjct: 1763 atggccacatgcagaagtgggccacgaagaccaatagcaatagaggtagcagcaataacg 1704

                                                                        
Query: 61   gctggaccggtcaaaaaccttacagccatagcaaatgtagccacagattttccacatgcc 120
            |||||||| ||||||||||| || ||||||||||| || ||||||||||||||||| || 
Sbjct: 1703 gctggacccgtcaaaaacctcactgccatagcaaaggtggccacagattttccacaagca 1644

                                             
Query: 121  acaatttttggttgcaaagccatgaacaaacct 153
            | ||| || ||||||||||||||||| ||||||
Sbjct: 1643 ataatcttcggttgcaaagccatgaataaacct 1611