Jatropha Genome Database
- JcCA0216321.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0216321.10 - phase: 0
(402 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29923.m000817 ccaat-binding transcription factor subunit A, puta... 468 e-131
29805.m001490 ccaat-binding transcription factor subunit A, puta... 109 1e-23
29992.m001420 ccaat-binding transcription factor subunit A, puta... 58 4e-08
27699.m000212 ccaat-binding transcription factor subunit A, puta... 58 4e-08
29966.m000228 ccaat-binding transcription factor subunit A, puta... 54 7e-07
>29923.m000817 ccaat-binding transcription factor subunit A,
putative
Length = 525
Score = 468 bits (236), Expect = e-131
Identities = 320/348 (91%)
Strand = Plus / Plus
Query: 1 atggctgagaacccaacaagtccagcaggagggagccatgagagcggtggtgagcagagc 60
||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 1 atggcggataacccaacaagtccagcaggagggagccacgagagtggtggtgagcagagc 60
Query: 61 ccgcactctggagtgagggaacaggataggtacctgcctattgccaacataagcaggatc 120
|| ||||| ||||||||||| |||||||| || || |||||||| |||||||||||||||
Sbjct: 61 ccacactccggagtgagggagcaggatagatatcttcctattgctaacataagcaggatc 120
Query: 121 atgaagaaggctttgcctgccaatggaaaaattgctaaagatgctaaggatactgtgcag 180
|||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 121 atgaagaaagctttgcctgccaatggaaaaatcgctaaagatgcaaaggatactgtccaa 180
Query: 181 gaatgtgtctctgaatttattagctttattaccagcgaggcgagtgataagtgtcagaag 240
||||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 181 gaatgtgtctcggagtttattagctttattacgagcgaggcaagtgataagtgtcagaag 240
Query: 241 gagaaaagaaagacaatcaatggagatgatttgttgtgggcgatggcaactctaggcttt 300
|||||||| |||||||||||||| ||||||||||||||||| ||||| || ||||||||
Sbjct: 241 gagaaaaggaagacaatcaatggggatgatttgttgtgggcaatggccacattaggcttt 300
Query: 301 gaggactatattgaaccacttaaggtgtaccttgctaggtacagggag 348
||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 301 gaggactatattgaaccgcttaaggtgtacctggctaggtacagggag 348
>29805.m001490 ccaat-binding transcription factor subunit A,
putative
Length = 543
Score = 109 bits (55), Expect = 1e-23
Identities = 169/207 (81%)
Strand = Plus / Plus
Query: 118 atcatgaagaaggctttgcctgccaatggaaaaattgctaaagatgctaaggatactgtg 177
||||||||||| ||| | ||||| ||||| || || ||||| ||||| ||||| |||||
Sbjct: 139 atcatgaagaaagctcttcctgctaatggtaagatcgctaaggatgccaaggaaactgtt 198
Query: 178 caggaatgtgtctctgaatttattagctttattaccagcgaggcgagtgataagtgtcag 237
||||||||||| ||||| || || ||||| || |||||||| |||||||||||||| |||
Sbjct: 199 caggaatgtgtttctgagttcatcagcttcatcaccagcgaagcgagtgataagtgccag 258
Query: 238 aaggagaaaagaaagacaatcaatggagatgatttgttgtgggcgatggcaactctaggc 297
| ||||| || || ||||| ||||| || ||||| | ||||| ||||| || ||||
Sbjct: 259 agagagaagaggaaaacaattaatggtgacgatttactatgggccatggctacattaggt 318
Query: 298 tttgaggactatattgaaccacttaag 324
|||||||| |||||||| || ||||||
Sbjct: 319 tttgaggattatattgatcctcttaag 345
>29992.m001420 ccaat-binding transcription factor subunit A,
putative
Length = 702
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 142 aatggaaaaattgctaaagatgctaaggatactgtgcaggaatgtgtctctgaatttatt 201
|||||||||||| | |||||||| ||||| ||||| || ||||| || |||||||| |||
Sbjct: 244 aatggaaaaatttcgaaagatgcaaaggagactgttcaagaatgcgtgtctgaattcatt 303
Query: 202 agctt 206
|||||
Sbjct: 304 agctt 308
>27699.m000212 ccaat-binding transcription factor subunit A,
putative
Length = 549
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 157 aaagatgctaaggatactgtgcaggaatgtgtctctgaatttattagctttat 209
|||||||| ||||| || ||||| || ||||| ||||||||||||||||||||
Sbjct: 145 aaagatgccaaggagacagtgcaagagtgtgtgtctgaatttattagctttat 197
>29966.m000228 ccaat-binding transcription factor subunit A,
putative
Length = 594
Score = 54.0 bits (27), Expect = 7e-07
Identities = 150/191 (78%)
Strand = Plus / Plus
Query: 112 agcaggatcatgaagaaggctttgcctgccaatggaaaaattgctaaagatgctaaggat 171
||||||||||||||||| ||||| || || |||| ||| ||| | || |||||||| ||
Sbjct: 106 agcaggatcatgaagaaagctttaccagctaatgcaaagatttcaaaggatgctaaagag 165
Query: 172 actgtgcaggaatgtgtctctgaatttattagctttattaccagcgaggcgagtgataag 231
|| || ||||| ||||| || || || || || || || ||| | || || |||||||
Sbjct: 166 acagttcaggagtgtgtgtcagagttcataagtttcatcaccggagaagcctctgataag 225
Query: 232 tgtcagaaggagaaaagaaagacaatcaatggagatgatttgttgtgggcgatggcaact 291
||||| | |||||| || ||||| ||||| || |||||| | |||||||| ||| | |||
Sbjct: 226 tgtcaaagggagaagaggaagacgatcaacggtgatgatcttttgtgggccatgactact 285
Query: 292 ctaggctttga 302
||||| |||||
Sbjct: 286 ctaggttttga 296