Jatropha Genome Database

JcCA0214811.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0214811.10 - phase: 0 /pseudo
         (488 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29762.m000496 ubiquitin-activating enzyme E1, putative                561   e-159

>29762.m000496 ubiquitin-activating enzyme E1, putative
          Length = 1404

 Score =  561 bits (283), Expect = e-159
 Identities = 355/379 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcacaggcaggttatacatactgagccatttattggtcagcccaaagtgaaatctgct 60
           |||||||| |||||||||||||||||  |||||||||||||||| |||||||||||||||
Sbjct: 397 atgcacagacaggttatacatactgaagcatttattggtcagccaaaagtgaaatctgct 456

                                                                       
Query: 61  gctgctgcctgtcgctcgatcaactccaccattcagattgtggagcaccaagaagcttta 120
           |||||||||||||||||||||||||| || ||||||||||| || |||||||||||||||
Sbjct: 457 gctgctgcctgtcgctcgatcaactctactattcagattgttgaacaccaagaagcttta 516

                                                                       
Query: 121 cgcacacacaatgccttggaaatatttagccaatatgacgtaatagtagatgcaacagat 180
           ||||||  ||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 517 cgcacatccaatgccttggaaatttttagccaatatgacataatagtagatgcaacagat 576

                                                                       
Query: 181 aatgccccaagccgttacatgatcagtgattgttgtgtggtgttgggaaagcctcttgtt 240
           ||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 577 aatgctccaagccgttacatgattagtgattgttgtgtagtgttgggaaagcctcttgtt 636

                                                                       
Query: 241 tctggtgctgcattgggattagaagggcagctcacagtttataattacaaaggaggtcca 300
           || ||||||||||||||||| |||||||||||||| || |||||||||||||||||||| 
Sbjct: 637 tcaggtgctgcattgggattggaagggcagctcacggtctataattacaaaggaggtcct 696

                                                                       
Query: 301 tgctatcgatgcctttttccaaccccacctcctacaacagcatgccaaagatgtgctgat 360
           |||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 697 tgctatcggtgcctttttccaaccccacctccttcaactgcatgccaaagatgtgctgat 756

                              
Query: 361 agtggagttttaggagttg 379
           ||||||||| |||||||||
Sbjct: 757 agtggagttctaggagttg 775