Jatropha Genome Database

JcCA0207521.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0207521.10 + phase: 0 /pseudo/partial
         (287 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27742.m000246 transcription factor, putative                           64   5e-10

>27742.m000246 transcription factor, putative
          Length = 1035

 Score = 63.9 bits (32), Expect = 5e-10
 Identities = 75/88 (85%), Gaps = 1/88 (1%)
 Strand = Plus / Plus

                                                                       
Query: 66  aaccaggctaaggaagatcgtactcataggaagtgtaggacttgttgtaatagtcgtggt 125
           ||||| || ||| ||||| |||| ||||| | ||| ||||| |||||||| |||||||||
Sbjct: 403 aaccaagccaagaaagattgtacccatagaaggtgcaggacctgttgtaaaagtcgtggt 462

                                       
Query: 126 tatgattgtg-tactcacttgaagagca 152
           ||||| |||| ||||||| |||||||||
Sbjct: 463 tatgactgtgctactcacgtgaagagca 490