Jatropha Genome Database

JcCA0207121.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0207121.10 + phase: 0 /pseudo
         (715 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27798.m000581 conserved hypothetical protein                          585   e-166

>27798.m000581 conserved hypothetical protein
          Length = 2607

 Score =  585 bits (295), Expect = e-166
 Identities = 445/495 (89%)
 Strand = Plus / Plus

                                                                       
Query: 91  aagaataaatttcgggagcgagaggccagcgacgacgccctcggttaccctgatatagat 150
           ||||||||||||||||||||||| || | ||| || || |||||||| ||||| ||||| 
Sbjct: 85  aagaataaatttcgggagcgagaagcaaccgatgatgcactcggttatcctgaaatagac 144

                                                                       
Query: 151 gaggatgcattattgaatactcagtgccctaaaaatttggagcttagatggcagacggaa 210
           |||  |||||| |||||||| |||||||||| |||||||||||| |||||||| || |||
Sbjct: 145 gagactgcattgttgaatacgcagtgccctagaaatttggagctgagatggcaaacagaa 204

                                                                       
Query: 211 gttagctctagtatttatgcttctcctttgatcgctgatattaacagtgatggcaaactt 270
           || |||||||| |||||||||||||||||||| ||||| ||||| |||||||| || |||
Sbjct: 205 gtcagctctagcatttatgcttctcctttgattgctgacattaatagtgatgggaagctt 264

                                                                       
Query: 271 gatatagtagtgccttcttttgttcactaccttgaagttctagaaggctctgatggagac 330
           ||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||| |||
Sbjct: 265 gatatagtagttccttctttcgttcactaccttgaagttcttgaaggttctgatggtgac 324

                                                                       
Query: 331 aaaatgcctggttggcctgctttccaccagtcaactgtgcacgccagtcctcttctatat 390
           |||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 325 aaaatgccaggttggcctgctttccatcagtcaacggtgcatgccagtcctcttctatat 384

                                                                       
Query: 391 gacattgacaaggatggtgtgagagaaattgcattggctacctacaacggtgaagttctc 450
           || ||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 385 gatattgacaaggatggtgttagagaaattgctttggctacttacaatggtgaagttctc 444

                                                                       
Query: 451 tttttcagggtgtcaggctacatgatgacagagaaactggttgtacctcgtaggagtgtt 510
           || |||||||| || ||||| |||||||||||||||||||| |||||||||||||| |||
Sbjct: 445 ttcttcagggtatcgggctatatgatgacagagaaactggtggtacctcgtaggagggtt 504

                                                                       
Query: 511 aaaaaagattggcatgtaggtttaaatcctgaccctgtggatcgttctcatccagatgtt 570
           | ||||||||||||||| ||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 505 agaaaagattggcatgtgggtttgaatcctgaccctgtagatcgttctcagccagatgtt 564

                          
Query: 571 catgatgagcaactt 585
           |||||||| ||||||
Sbjct: 565 catgatgaccaactt 579