Jatropha Genome Database

JcCA0193141.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0193141.20 - phase: 2 /pseudo/partial
         (284 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004700 AMP dependent CoA ligase, putative                      127   4e-29

>29929.m004700 AMP dependent CoA ligase, putative
          Length = 1647

 Score =  127 bits (64), Expect = 4e-29
 Identities = 164/196 (83%), Gaps = 1/196 (0%)
 Strand = Plus / Plus

                                                                        
Query: 71   gaagcaggccaggttcctgtggcctttgtggtacgacaacatggaagaaggattaatgaa 130
            |||||||| ||||| ||  |||||||||||||||| |||  |||||| |  ||| |||||
Sbjct: 1432 gaagcaggtcaggtacccatggcctttgtggtacggcaaagtggaagcacaattgatgaa 1491

                                                                        
Query: 131  tcacaaattaaggattttattgctcaacaggttgcaccatacaagagaatacgaagagta 190
            |||||||| || |||||||| ||| |||||||||| ||||| ||||| |||||||| || 
Sbjct: 1492 tcacaaatcaaagattttatagctaaacaggttgcgccatataagaggatacgaagggtt 1551

                                                                        
Query: 191  atcttcgttgattcattaccaaagaatgctcctaggtaaggtactcaggaaagagttaat 250
            |||||| ||||||||||||| ||||||||     ||||| || ||||||||||| |||||
Sbjct: 1552 atcttcattgattcattaccgaagaatgc-aggcggtaaagtgctcaggaaagacttaat 1610

                            
Query: 251  caaacttgcactatca 266
            || | |||||||||||
Sbjct: 1611 cagatttgcactatca 1626